Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 872)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 46285)	% of Background Sequences with Motif
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-163	-3.765e+02	0.0000	298.0	34.17%	2221.7	4.80%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-30	-6.930e+01	0.0000	207.0	23.74%	4714.3	10.19%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-27	-6.295e+01	0.0000	222.0	25.46%	5514.4	11.92%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-23	-5.494e+01	0.0000	268.0	30.73%	7726.8	16.70%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-23	-5.347e+01	0.0000	109.0	12.50%	1920.1	4.15%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-19	-4.385e+01	0.0000	105.0	12.04%	2057.7	4.45%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-15	-3.626e+01	0.0000	164.0	18.81%	4477.9	9.68%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-14	-3.439e+01	0.0000	80.0	9.17%	1539.8	3.33%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-13	-3.021e+01	0.0000	101.0	11.58%	2388.4	5.16%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-11	-2.712e+01	0.0000	100.0	11.47%	2481.1	5.36%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-11	-2.640e+01	0.0000	127.0	14.56%	3539.1	7.65%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-11	-2.560e+01	0.0000	87.0	9.98%	2076.6	4.49%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-10	-2.505e+01	0.0000	226.0	25.92%	7818.1	16.90%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-9	-2.271e+01	0.0000	122.0	13.99%	3547.1	7.67%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-9	-2.229e+01	0.0000	93.0	10.67%	2443.7	5.28%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-9	-2.184e+01	0.0000	172.0	19.72%	5691.7	12.30%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-8	-2.014e+01	0.0000	41.0	4.70%	735.4	1.59%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-8	-1.926e+01	0.0000	53.0	6.08%	1142.7	2.47%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-7	-1.703e+01	0.0000	53.0	6.08%	1224.2	2.65%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-6	-1.587e+01	0.0000	59.0	6.77%	1486.9	3.21%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-6	-1.560e+01	0.0000	18.0	2.06%	208.1	0.45%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-6	-1.496e+01	0.0000	172.0	19.72%	6282.5	13.58%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-6	-1.433e+01	0.0000	19.0	2.18%	252.1	0.54%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e-6	-1.394e+01	0.0000	24.0	2.75%	393.9	0.85%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-6	-1.386e+01	0.0000	49.0	5.62%	1214.0	2.62%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-5	-1.322e+01	0.0000	19.0	2.18%	272.1	0.59%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-5	-1.212e+01	0.0001	29.0	3.33%	594.4	1.29%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-5	-1.177e+01	0.0001	70.0	8.03%	2134.9	4.62%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-5	-1.168e+01	0.0001	15.0	1.72%	199.0	0.43%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-4	-1.140e+01	0.0001	48.0	5.50%	1294.1	2.80%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-4	-1.123e+01	0.0002	35.0	4.01%	828.1	1.79%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-4	-1.110e+01	0.0002	88.0	10.09%	2931.8	6.34%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e-4	-1.085e+01	0.0002	20.0	2.29%	352.5	0.76%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-4	-1.040e+01	0.0003	36.0	4.13%	899.4	1.94%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e-4	-1.033e+01	0.0003	15.0	1.72%	223.5	0.48%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-4	-1.024e+01	0.0004	79.0	9.06%	2618.0	5.66%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-3	-9.006e+00	0.0012	19.0	2.18%	372.8	0.81%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-3	-8.021e+00	0.0031	98.0	11.24%	3657.9	7.91%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-3	-8.015e+00	0.0031	61.0	7.00%	2035.5	4.40%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-3	-8.001e+00	0.0031	17.0	1.95%	339.1	0.73%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-3	-7.570e+00	0.0046	27.0	3.10%	701.0	1.52%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-3	-7.374e+00	0.0054	73.0	8.37%	2610.7	5.64%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-3	-7.286e+00	0.0058	20.0	2.29%	463.4	1.00%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-2	-6.865e+00	0.0086	71.0	8.14%	2572.5	5.56%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-2	-6.582e+00	0.0112	25.0	2.87%	675.0	1.46%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-2	-6.576e+00	0.0112	72.0	8.26%	2646.2	5.72%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-2	-5.950e+00	0.0202	80.0	9.17%	3077.4	6.65%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-2	-5.704e+00	0.0253	50.0	5.73%	1763.4	3.81%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-2	-5.663e+00	0.0258	12.0	1.38%	251.2	0.54%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e-2	-5.558e+00	0.0281	16.0	1.83%	392.7	0.85%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-2	-5.404e+00	0.0321	48.0	5.50%	1704.4	3.68%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-2	-5.383e+00	0.0322	13.0	1.49%	294.2	0.64%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e-2	-5.369e+00	0.0322	49.0	5.62%	1751.8	3.79%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-2	-5.355e+00	0.0322	20.0	2.29%	549.1	1.19%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-2	-5.329e+00	0.0322	11.0	1.26%	229.5	0.50%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e-2	-5.128e+00	0.0385	2.0	0.23%	6.9	0.01%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-2	-5.123e+00	0.0385	39.0	4.47%	1340.9	2.90%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-2	-5.113e+00	0.0385	113.0	12.96%	4740.0	10.25%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e-2	-5.109e+00	0.0385	75.0	8.60%	2952.8	6.38%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-2	-5.083e+00	0.0385	27.0	3.10%	841.3	1.82%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-2	-5.059e+00	0.0385	42.0	4.82%	1475.9	3.19%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e-2	-5.003e+00	0.0394	6.0	0.69%	87.9	0.19%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-2	-4.979e+00	0.0398	97.0	11.12%	3999.2	8.65%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-2	-4.966e+00	0.0398	12.0	1.38%	275.3	0.60%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-2	-4.880e+00	0.0425	71.0	8.14%	2797.5	6.05%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e-2	-4.823e+00	0.0444	4.0	0.46%	41.3	0.09%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-2	-4.789e+00	0.0452	55.0	6.31%	2078.1	4.49%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-1	-4.567e+00	0.0556	10.0	1.15%	221.8	0.48%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e-1	-4.536e+00	0.0566	60.0	6.88%	2335.7	5.05%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e-1	-4.503e+00	0.0576	12.0	1.38%	293.3	0.63%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e-1	-4.477e+00	0.0583	47.0	5.39%	1753.2	3.79%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-1	-4.383e+00	0.0632	15.0	1.72%	409.2	0.88%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e-1	-4.304e+00	0.0674	22.0	2.52%	690.4	1.49%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-1	-4.110e+00	0.0807	68.0	7.80%	2762.4	5.97%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e-1	-4.095e+00	0.0808	11.0	1.26%	274.8	0.59%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e-1	-4.057e+00	0.0829	78.0	8.94%	3241.3	7.01%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e-1	-3.991e+00	0.0874	91.0	10.44%	3872.7	8.37%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-3.709e+00	0.1144	9.0	1.03%	218.5	0.47%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-1	-3.681e+00	0.1161	58.0	6.65%	2355.4	5.09%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e-1	-3.668e+00	0.1161	2.0	0.23%	13.4	0.03%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-1	-3.650e+00	0.1168	29.0	3.33%	1039.7	2.25%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-1	-3.598e+00	0.1215	23.0	2.64%	784.5	1.70%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-1	-3.422e+00	0.1432	21.0	2.41%	713.1	1.54%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e-1	-3.396e+00	0.1452	74.0	8.49%	3158.9	6.83%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-1	-3.356e+00	0.1494	122.0	13.99%	5510.6	11.91%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-1	-3.330e+00	0.1515	15.0	1.72%	469.3	1.01%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-1	-3.252e+00	0.1619	27.0	3.10%	989.0	2.14%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e-1	-3.161e+00	0.1754	85.0	9.75%	3733.2	8.07%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-1	-3.148e+00	0.1757	14.0	1.61%	440.8	0.95%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-1	-3.075e+00	0.1868	38.0	4.36%	1507.8	3.26%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-1	-3.059e+00	0.1876	10.0	1.15%	286.0	0.62%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-1	-2.965e+00	0.2039	15.0	1.72%	494.3	1.07%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e-1	-2.952e+00	0.2044	23.0	2.64%	842.0	1.82%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-1	-2.942e+00	0.2044	23.0	2.64%	842.1	1.82%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-1	-2.887e+00	0.2136	18.0	2.06%	628.4	1.36%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e-1	-2.848e+00	0.2197	79.0	9.06%	3502.3	7.57%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e-1	-2.818e+00	0.2242	7.0	0.80%	182.6	0.39%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e-1	-2.817e+00	0.2242	24.0	2.75%	899.7	1.95%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-1	-2.808e+00	0.2242	12.0	1.38%	380.8	0.82%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-1	-2.794e+00	0.2242	8.0	0.92%	221.9	0.48%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-1	-2.793e+00	0.2242	34.0	3.90%	1358.7	2.94%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e-1	-2.722e+00	0.2346	19.0	2.18%	686.6	1.48%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-1	-2.681e+00	0.2420	9.0	1.03%	266.7	0.58%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e-1	-2.676e+00	0.2420	5.0	0.57%	115.7	0.25%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-1	-2.662e+00	0.2420	32.0	3.67%	1282.3	2.77%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-1	-2.658e+00	0.2420	73.0	8.37%	3247.4	7.02%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-2.512e+00	0.2760	31.0	3.56%	1255.2	2.71%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-1	-2.504e+00	0.2760	29.0	3.33%	1163.0	2.51%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-1	-2.500e+00	0.2760	19.0	2.18%	707.8	1.53%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-1	-2.477e+00	0.2780	28.0	3.21%	1120.1	2.42%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e-1	-2.434e+00	0.2876	7.0	0.80%	200.6	0.43%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-1	-2.355e+00	0.3083	22.0	2.52%	858.4	1.86%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-1	-2.331e+00	0.3132	5.0	0.57%	128.4	0.28%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-2.291e+00	0.3229	4.0	0.46%	94.0	0.20%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-2.269e+00	0.3272	85.0	9.75%	3927.0	8.49%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-2.220e+00	0.3409	17.0	1.95%	645.2	1.39%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-2.164e+00	0.3575	19.0	2.18%	742.4	1.61%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-2.147e+00	0.3605	29.0	3.33%	1211.3	2.62%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-2.115e+00	0.3691	76.0	8.72%	3516.5	7.60%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-2.082e+00	0.3780	25.0	2.87%	1032.0	2.23%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-2.069e+00	0.3801	30.0	3.44%	1270.1	2.75%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-2.054e+00	0.3825	79.0	9.06%	3681.4	7.96%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-2.030e+00	0.3888	18.0	2.06%	711.8	1.54%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-2.023e+00	0.3888	65.0	7.45%	2990.9	6.47%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-2.021e+00	0.3888	7.0	0.80%	223.3	0.48%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-2.012e+00	0.3888	16.0	1.83%	621.3	1.34%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-2.010e+00	0.3888	54.0	6.19%	2448.2	5.29%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.953e+00	0.4033	20.0	2.29%	813.5	1.76%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.940e+00	0.4054	11.0	1.26%	402.8	0.87%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-1.924e+00	0.4087	23.0	2.64%	959.0	2.07%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.907e+00	0.4127	27.0	3.10%	1152.0	2.49%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.906e+00	0.4127	11.0	1.26%	406.0	0.88%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-1.882e+00	0.4168	20.0	2.29%	822.0	1.78%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.863e+00	0.4215	41.0	4.70%	1838.5	3.97%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-1.846e+00	0.4258	15.0	1.72%	594.0	1.28%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.832e+00	0.4284	60.0	6.88%	2786.9	6.03%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.807e+00	0.4362	31.0	3.56%	1360.8	2.94%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-1.798e+00	0.4369	14.0	1.61%	552.9	1.20%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.773e+00	0.4447	36.0	4.13%	1610.1	3.48%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-1.744e+00	0.4543	132.0	15.14%	6468.6	13.98%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-1.694e+00	0.4743	21.0	2.41%	895.1	1.94%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.676e+00	0.4797	33.0	3.78%	1482.0	3.20%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-1.653e+00	0.4874	21.0	2.41%	901.1	1.95%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.621e+00	0.4999	11.0	1.26%	432.5	0.94%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-1.617e+00	0.4999	16.0	1.83%	667.6	1.44%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-1.606e+00	0.5004	25.0	2.87%	1102.2	2.38%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.553e+00	0.5240	28.0	3.21%	1258.4	2.72%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-1.551e+00	0.5240	13.0	1.49%	533.2	1.15%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.515e+00	0.5372	4.0	0.46%	127.3	0.28%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.512e+00	0.5372	24.0	2.75%	1069.2	2.31%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-1.496e+00	0.5398	17.0	1.95%	731.4	1.58%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.465e+00	0.5534	21.0	2.41%	930.7	2.01%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-1.461e+00	0.5534	1.0	0.11%	14.1	0.03%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.456e+00	0.5534	106.0	12.16%	5238.0	11.32%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.440e+00	0.5562	8.0	0.92%	311.0	0.67%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.418e+00	0.5652	18.0	2.06%	791.3	1.71%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.416e+00	0.5652	31.0	3.56%	1433.3	3.10%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.399e+00	0.5686	3.0	0.34%	91.2	0.20%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-1.393e+00	0.5686	17.0	1.95%	746.7	1.61%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-1.359e+00	0.5847	2.0	0.23%	52.6	0.11%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.341e+00	0.5915	17.0	1.95%	754.0	1.63%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-1.328e+00	0.5953	5.0	0.57%	183.9	0.40%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-1.284e+00	0.6187	21.0	2.41%	961.8	2.08%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-1.280e+00	0.6187	18.0	2.06%	813.6	1.76%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.275e+00	0.6187	47.0	5.39%	2274.2	4.92%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-1.274e+00	0.6187	20.0	2.29%	913.3	1.97%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-1.257e+00	0.6201	16.0	1.83%	718.4	1.55%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.229e+00	0.6337	11.0	1.26%	477.2	1.03%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.182e+00	0.6605	44.0	5.05%	2147.2	4.64%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-1.177e+00	0.6605	8.0	0.92%	339.0	0.73%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-1.166e+00	0.6634	13.0	1.49%	584.3	1.26%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-1.164e+00	0.6634	2.0	0.23%	60.8	0.13%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.163e+00	0.6634	22.0	2.52%	1034.4	2.24%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-1.158e+00	0.6634	1.0	0.11%	20.1	0.04%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-1.147e+00	0.6634	7.0	0.80%	293.8	0.64%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.130e+00	0.6679	17.0	1.95%	789.6	1.71%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.118e+00	0.6721	4.0	0.46%	153.6	0.33%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.111e+00	0.6731	67.0	7.68%	3354.2	7.25%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-1.111e+00	0.6731	33.0	3.78%	1604.0	3.47%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.092e+00	0.6787	17.0	1.95%	796.6	1.72%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.044e+00	0.7082	11.0	1.26%	503.2	1.09%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.019e+00	0.7218	61.0	7.00%	3077.5	6.65%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.009e+00	0.7253	24.0	2.75%	1169.3	2.53%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-9.868e-01	0.7374	71.0	8.14%	3610.6	7.81%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-9.785e-01	0.7396	1.0	0.11%	25.2	0.05%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-9.503e-01	0.7566	6.0	0.69%	266.8	0.58%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-9.293e-01	0.7686	25.0	2.87%	1240.8	2.68%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-9.071e-01	0.7816	5.0	0.57%	221.6	0.48%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-9.007e-01	0.7825	17.0	1.95%	834.3	1.80%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-8.818e-01	0.7932	3.0	0.34%	124.4	0.27%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-8.697e-01	0.7987	10.0	1.15%	480.5	1.04%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-8.601e-01	0.8022	161.0	18.46%	8402.4	18.17%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-8.588e-01	0.8022	14.0	1.61%	688.0	1.49%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-8.534e-01	0.8022	2.0	0.23%	77.4	0.17%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-8.488e-01	0.8022	4.0	0.46%	177.2	0.38%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-8.454e-01	0.8022	5.0	0.57%	228.6	0.49%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-8.392e-01	0.8022	1.0	0.11%	30.5	0.07%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-8.279e-01	0.8033	47.0	5.39%	2419.3	5.23%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-7.917e-01	0.8288	1.0	0.11%	32.1	0.07%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-7.800e-01	0.8343	5.0	0.57%	236.5	0.51%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-7.699e-01	0.8386	3.0	0.34%	134.6	0.29%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-7.698e-01	0.8386	21.0	2.41%	1074.0	2.32%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-7.668e-01	0.8386	9.0	1.03%	446.1	0.96%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-7.556e-01	0.8386	142.0	16.28%	7468.6	16.15%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-7.552e-01	0.8386	2.0	0.23%	84.2	0.18%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-7.552e-01	0.8386	2.0	0.23%	84.2	0.18%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-7.462e-01	0.8386	17.0	1.95%	870.2	1.88%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-7.391e-01	0.8386	9.0	1.03%	451.9	0.98%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-7.315e-01	0.8386	4.0	0.46%	190.8	0.41%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-6.963e-01	0.8639	37.0	4.24%	1943.8	4.20%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-6.858e-01	0.8689	8.0	0.92%	408.2	0.88%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-6.830e-01	0.8689	4.0	0.46%	196.1	0.42%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-6.773e-01	0.8689	63.0	7.22%	3332.0	7.20%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-6.463e-01	0.8912	3.0	0.34%	147.8	0.32%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-6.370e-01	0.8954	62.0	7.11%	3299.8	7.13%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-6.369e-01	0.8954	9.0	1.03%	471.9	1.02%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-6.354e-01	0.8954	1.0	0.11%	40.0	0.09%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-6.305e-01	0.8954	5.0	0.57%	257.2	0.56%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-6.168e-01	0.8970	102.0	11.70%	5441.1	11.76%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-6.072e-01	0.9015	26.0	2.98%	1391.8	3.01%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-6.031e-01	0.9015	1.0	0.11%	42.7	0.09%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-5.965e-01	0.9030	3.0	0.34%	153.7	0.33%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-5.884e-01	0.9063	15.0	1.72%	806.1	1.74%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-5.830e-01	0.9071	10.0	1.15%	537.8	1.16%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-5.691e-01	0.9157	40.0	4.59%	2158.5	4.67%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-5.617e-01	0.9184	12.0	1.38%	651.4	1.41%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-5.521e-01	0.9232	5.0	0.57%	270.2	0.58%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-5.499e-01	0.9232	52.0	5.96%	2812.1	6.08%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-5.465e-01	0.9232	5.0	0.57%	271.4	0.59%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-5.433e-01	0.9232	3.0	0.34%	160.6	0.35%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-5.329e-01	0.9248	18.0	2.06%	986.1	2.13%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-5.298e-01	0.9248	2.0	0.23%	105.1	0.23%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-5.245e-01	0.9248	5.0	0.57%	275.3	0.60%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-5.206e-01	0.9248	7.0	0.80%	387.1	0.84%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-5.124e-01	0.9279	54.0	6.19%	2941.4	6.36%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-5.094e-01	0.9279	32.0	3.67%	1755.4	3.79%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-5.056e-01	0.9279	1.0	0.11%	49.6	0.11%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-5.049e-01	0.9279	20.0	2.29%	1105.7	2.39%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-4.913e-01	0.9319	23.0	2.64%	1274.5	2.76%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-4.898e-01	0.9319	7.0	0.80%	394.1	0.85%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-4.755e-01	0.9388	3.0	0.34%	170.0	0.37%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-4.722e-01	0.9388	23.0	2.64%	1282.8	2.77%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-4.690e-01	0.9388	27.0	3.10%	1502.9	3.25%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-4.684e-01	0.9388	10.0	1.15%	567.5	1.23%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-4.645e-01	0.9388	2.0	0.23%	113.2	0.24%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-4.569e-01	0.9388	4.0	0.46%	231.5	0.50%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-4.447e-01	0.9447	5.0	0.57%	291.4	0.63%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-4.375e-01	0.9477	1.0	0.11%	55.4	0.12%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-4.356e-01	0.9477	5.0	0.57%	293.1	0.63%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-4.351e-01	0.9477	2.0	0.23%	117.9	0.25%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-4.262e-01	0.9477	12.0	1.38%	692.1	1.50%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-4.222e-01	0.9477	5.0	0.57%	296.0	0.64%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-4.214e-01	0.9477	4.0	0.46%	238.1	0.51%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-4.077e-01	0.9532	1.0	0.11%	58.3	0.13%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-3.962e-01	0.9604	7.0	0.80%	418.0	0.90%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-3.931e-01	0.9604	29.0	3.33%	1651.0	3.57%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-3.886e-01	0.9604	4.0	0.46%	245.2	0.53%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-3.641e-01	0.9803	2.0	0.23%	128.8	0.28%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-3.634e-01	0.9803	1.0	0.11%	63.9	0.14%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-3.412e-01	0.9953	14.0	1.61%	838.2	1.81%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-3.404e-01	0.9953	134.0	15.37%	7407.0	16.01%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-3.402e-01	0.9953	48.0	5.50%	2731.9	5.91%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-3.340e-01	0.9953	20.0	2.29%	1181.6	2.55%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-3.312e-01	0.9953	22.0	2.52%	1295.7	2.80%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-3.272e-01	0.9953	8.0	0.92%	498.5	1.08%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-3.106e-01	1.0000	1.0	0.11%	70.9	0.15%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-3.101e-01	1.0000	2.0	0.23%	138.5	0.30%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-3.088e-01	1.0000	31.0	3.56%	1813.3	3.92%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-3.005e-01	1.0000	4.0	0.46%	267.6	0.58%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-2.841e-01	1.0000	17.0	1.95%	1038.4	2.24%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-2.798e-01	1.0000	5.0	0.57%	335.7	0.73%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-2.783e-01	1.0000	1.0	0.11%	75.3	0.16%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-2.750e-01	1.0000	21.0	2.41%	1272.1	2.75%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-2.534e-01	1.0000	6.0	0.69%	406.6	0.88%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-2.511e-01	1.0000	7.0	0.80%	468.9	1.01%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-2.252e-01	1.0000	3.0	0.34%	226.2	0.49%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-2.214e-01	1.0000	49.0	5.62%	2896.0	6.26%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-2.200e-01	1.0000	12.0	1.38%	784.2	1.70%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-2.149e-01	1.0000	23.0	2.64%	1430.0	3.09%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-2.134e-01	1.0000	3.0	0.34%	230.4	0.50%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-2.116e-01	1.0000	2.0	0.23%	162.9	0.35%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-2.018e-01	1.0000	2.0	0.23%	165.6	0.36%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.988e-01	1.0000	15.0	1.72%	976.5	2.11%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.959e-01	1.0000	4.0	0.46%	303.7	0.66%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.864e-01	1.0000	40.0	4.59%	2429.6	5.25%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.864e-01	1.0000	2.0	0.23%	170.7	0.37%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.860e-01	1.0000	8.0	0.92%	562.1	1.22%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.859e-01	1.0000	10.0	1.15%	685.4	1.48%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-1.852e-01	1.0000	28.0	3.21%	1745.7	3.77%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-1.753e-01	1.0000	19.0	2.18%	1231.6	2.66%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.749e-01	1.0000	2.0	0.23%	174.3	0.38%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-1.742e-01	1.0000	13.0	1.49%	876.0	1.89%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.723e-01	1.0000	12.0	1.38%	816.7	1.77%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.718e-01	1.0000	14.0	1.61%	937.3	2.03%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.712e-01	1.0000	1.0	0.11%	98.7	0.21%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.640e-01	1.0000	22.0	2.52%	1418.4	3.07%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-1.600e-01	1.0000	42.0	4.82%	2576.2	5.57%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-1.580e-01	1.0000	108.0	12.39%	6266.6	13.55%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.563e-01	1.0000	3.0	0.34%	253.5	0.55%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-1.491e-01	1.0000	6.0	0.69%	458.8	0.99%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.481e-01	1.0000	82.0	9.40%	4845.0	10.47%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.387e-01	1.0000	38.0	4.36%	2377.2	5.14%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.325e-01	1.0000	10.0	1.15%	725.2	1.57%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.313e-01	1.0000	1.0	0.11%	112.0	0.24%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.227e-01	1.0000	36.0	4.13%	2286.8	4.94%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.223e-01	1.0000	32.0	3.67%	2054.1	4.44%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-1.165e-01	1.0000	177.0	20.30%	10155.8	21.96%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-1.165e-01	1.0000	18.0	2.06%	1233.5	2.67%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.126e-01	1.0000	58.0	6.65%	3566.1	7.71%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.037e-01	1.0000	2.0	0.23%	207.2	0.45%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-9.300e-02	1.0000	123.0	14.11%	7261.2	15.70%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-8.859e-02	1.0000	9.0	1.03%	706.8	1.53%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-8.606e-02	1.0000	7.0	0.80%	577.5	1.25%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-8.449e-02	1.0000	10.0	1.15%	776.7	1.68%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-7.754e-02	1.0000	4.0	0.46%	378.2	0.82%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-7.095e-02	1.0000	1.0	0.11%	142.8	0.31%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-6.656e-02	1.0000	39.0	4.47%	2577.4	5.57%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-6.563e-02	1.0000	6.0	0.69%	534.4	1.16%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-5.838e-02	1.0000	7.0	0.80%	614.6	1.33%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-4.762e-02	1.0000	56.0	6.42%	3638.1	7.87%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-4.586e-02	1.0000	47.0	5.39%	3118.3	6.74%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-4.357e-02	1.0000	54.0	6.19%	3539.9	7.65%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-4.078e-02	1.0000	17.0	1.95%	1312.4	2.84%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-3.911e-02	1.0000	7.0	0.80%	651.4	1.41%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-3.680e-02	1.0000	54.0	6.19%	3572.0	7.72%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-3.314e-02	1.0000	71.0	8.14%	4585.0	9.91%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-3.159e-02	1.0000	18.0	2.06%	1408.0	3.04%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-2.715e-02	1.0000	17.0	1.95%	1362.3	2.95%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-2.707e-02	1.0000	5.0	0.57%	536.2	1.16%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-2.527e-02	1.0000	11.0	1.26%	971.5	2.10%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-2.361e-02	1.0000	63.0	7.22%	4187.5	9.05%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-2.225e-02	1.0000	1.0	0.11%	202.7	0.44%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-2.183e-02	1.0000	1.0	0.11%	203.6	0.44%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-2.171e-02	1.0000	12.0	1.38%	1055.0	2.28%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-2.165e-02	1.0000	15.0	1.72%	1257.3	2.72%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.109e-02	1.0000	12.0	1.38%	1058.6	2.29%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-2.004e-02	1.0000	3.0	0.34%	398.2	0.86%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.897e-02	1.0000	12.0	1.38%	1069.0	2.31%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.701e-02	1.0000	61.0	7.00%	4131.2	8.93%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.547e-02	1.0000	17.0	1.95%	1428.8	3.09%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.524e-02	1.0000	7.0	0.80%	734.0	1.59%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.461e-02	1.0000	1.0	0.11%	224.7	0.49%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-1.341e-02	1.0000	62.0	7.11%	4234.7	9.15%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-8.452e-03	1.0000	4.0	0.46%	543.5	1.17%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-6.540e-03	1.0000	6.0	0.69%	726.2	1.57%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-6.166e-03	1.0000	41.0	4.70%	3084.3	6.67%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-3.033e-03	1.0000	6.0	0.69%	785.8	1.70%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-1.040e-04	1.0000	84.0	9.63%	6341.7	13.71%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	44.9	0.10%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	22.8	0.05%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	0.000e+00	1.0000	0.0	0.00%	76.3	0.16%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	0.000e+00	1.0000	0.0	0.00%	91.6	0.20%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	0.000e+00	1.0000	0.0	0.00%	61.8	0.13%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	44.6	0.10%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	13.5	0.03%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	11.6	0.03%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	48.4	0.10%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	20.8	0.04%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.8	0.00%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	52.7	0.11%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	15.4	0.03%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	0.000e+00	1.0000	0.0	0.00%	543.5	1.17%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	35.8	0.08%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	4.9	0.01%