Information for 15-KCWKSATWTGSAG (Motif 19)

A C G T A G T C C G A T A C T G A T G C C G T A C G A T C G T A A C G T A C T G T A G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A G T C C G T A C G A T C G T A A C G T A T C G G T A C C G T A A C T G G T A C
p-value:1e-6
log p-value:-1.472e+01
Information Content per bp:1.823
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.4 +/- 32.3bp
Average Position of motif in Background43.8 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:KCWKSATWTGSAG
---ACATATGG--
 A C G T A G T C C G A T A C T G A T G C C G T A C G A T C G T A A C G T A C T G T A G C C G T A A C T G
A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:KCWKSATWTGSAG--
--TTCATTTGCATAT
 A C G T A G T C C G A T A C T G A T G C C G T A C G A T C G T A A C G T A C T G T A G C C G T A A C T G A C G T A C G T
A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:KCWKSATWTGSAG
---GHATATKCAT
 A C G T A G T C C G A T A C T G A T G C C G T A C G A T C G T A A C G T A C T G T A G C C G T A A C T G
A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:KCWKSATWTGSAG--
-----ATTTGCATAT
 A C G T A G T C C G A T A C T G A T G C C G T A C G A T C G T A A C G T A C T G T A G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:KCWKSATWTGSAG--
-----ATTTGCATAA
 A C G T A G T C C G A T A C T G A T G C C G T A C G A T C G T A A C G T A C T G T A G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:KCWKSATWTGSAG----
-TNTAATTTGCATANNN
 A C G T A G T C C G A T A C T G A T G C C G T A C G A T C G T A A C G T A C T G T A G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:KCWKSATWTGSAG----
-TNTAATTTGCATACNA
 A C G T A G T C C G A T A C T G A T G C C G T A C G A T C G T A A C G T A C T G T A G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:KCWKSATWTGSAG----
-TNTAATTTGCATACNA
 A C G T A G T C C G A T A C T G A T G C C G T A C G A T C G T A A C G T A C T G T A G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:KCWKSATWTGSAG
--NACATATGGN-
 A C G T A G T C C G A T A C T G A T G C C G T A C G A T C G T A A C G T A C T G T A G C C G T A A C T G
A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:KCWKSATWTGSAG
--ANCATATGGT-
 A C G T A G T C C G A T A C T G A T G C C G T A C G A T C G T A A C G T A C T G T A G C C G T A A C T G
A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T