Information for 11-CAGGGRGSTGGMA (Motif 13)

A G T C C G T A A C T G A C T G A C T G C T G A A C T G A T G C A C G T A C T G A C T G G T C A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C C G T A A T C G A G T C A G C T T G A C A G T C A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.897
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 21.8bp
Average Position of motif in Background51.5 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CAGGGRGSTGGMA-
-----GGTTGGCAT
 A G T C C G T A A C T G A C T G A C T G C T G A A C T G A T G C A C G T A C T G A C T G G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGGGRGSTGGMA----
-NGTAGGTTGGCATNNN
 A G T C C G T A A C T G A C T G A C T G C T G A A C T G A T G C A C G T A C T G A C T G G T C A C G T A A C G T A C G T A C G T A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:3
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CAGGGRGSTGGMA--
ANTTMRCASBNNNGTGYKAAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G C T G A A C T G A T G C A C G T A C T G A C T G G T C A C G T A A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

KLF13/MA0657.1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CAGGGRGSTGGMA-
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G C T G A A C T G A T G C A C G T A C T G A C T G G T C A C G T A A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGGGRGSTGGMA
--GGGGGGGG---
 A G T C C G T A A C T G A C T G A C T G C T G A A C T G A T G C A C G T A C T G A C T G G T C A C G T A
A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGRGSTGGMA-
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G C T G A A C T G A T G C A C G T A C T G A C T G G T C A C G T A A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0097.1_Zfp281_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGRGSTGGMA-
GGGGGGGGGGGGGGA
 A C G T A G T C C G T A A C T G A C T G A C T G C T G A A C T G A T G C A C G T A C T G A C T G G T C A C G T A A C G T
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

KLF16/MA0741.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGGGRGSTGGMA
-GGGGGCGTGGC-
 A G T C C G T A A C T G A C T G A C T G C T G A A C T G A T G C A C G T A C T G A C T G G T C A C G T A
A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAGGGRGSTGGMA
TGTCAGGGGGCG----
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G C T G A A C T G A T G C A C G T A C T G A C T G G T C A C G T A
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGGGRGSTGGMA
VCAGGTRDRY----
 A C G T A G T C C G T A A C T G A C T G A C T G C T G A A C T G A T G C A C G T A C T G A C T G G T C A C G T A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T