Information for 5-CCTAGGGCTA (Motif 9)

A G T C A G T C A C G T C G T A A C T G A C T G A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C A G T C A G T C A C G T C G T A A C T G A C T G
p-value:1e-2
log p-value:-6.464e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background60.5 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CCTAGGGCTA
NTGCCCTAGGGCAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A C T G A C T G A G T C A C G T C G T A
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCTAGGGCTA
TGCCTGAGGCN-
 A C G T A C G T A G T C A G T C A C G T C G T A A C T G A C T G A C T G A G T C A C G T C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCTAGGGCTA
NGCCTNAGGCN-
 A C G T A C G T A G T C A G T C A C G T C G T A A C T G A C T G A C T G A G T C A C G T C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCTAGGGCTA-
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A C T G A C T G A G T C A C G T C G T A A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCTAGGGCTA
NGCCTGAGGCN-
 A C G T A C G T A G T C A G T C A C G T C G T A A C T G A C T G A C T G A G T C A C G T C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCTAGGGCTA
-CTAGGCCT-
 A G T C A G T C A C G T C G T A A C T G A C T G A C T G A G T C A C G T C G T A
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTAGGGCTA
-CNAGGCCT-
 A G T C A G T C A C G T C G T A A C T G A C T G A C T G A G T C A C G T C G T A
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCTAGGGCTA-
SCCTSAGGSCAW
 A C G T A G T C A G T C A C G T C G T A A C T G A C T G A C T G A G T C A C G T C G T A A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCTAGGGCTA
CCGCCCAAGGGCAG
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A C T G A C T G A G T C A C G T C G T A
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCTAGGGCTA-
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A C T G A C T G A G T C A C G T C G T A A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T