Information for 1-GGCAGGCAGGAAG (Motif 4)

C T A G A C T G A G T C T C G A C T A G A C T G A G T C C G T A C T A G C T A G G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C
p-value:1e-6
log p-value:-1.590e+01
Information Content per bp:1.841
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif8.57%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.6 +/- 7.3bp
Average Position of motif in Background55.2 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GGCAGGCAGGAAG--
-----ACAGGAAGTG
 C T A G A C T G A G T C T C G A C T A G A C T G A G T C C G T A C T A G C T A G G T C A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGCAGGCAGGAAG--
-----ACAGGAAGTG
 C T A G A C T G A G T C T C G A C T A G A C T G A G T C C G T A C T A G C T A G G T C A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCAGGCAGGAAG-----
GGAAGGAAGGAAGGAAGG
 C T A G A C T G A G T C T C G A C T A G A C T G A G T C C G T A C T A G C T A G G T C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGGCAGGAAG
TGGCAGNCTGCCAG
 A C G T C T A G A C T G A G T C T C G A C T A G A C T G A G T C C G T A C T A G C T A G G T C A C G T A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGCAGGCAGGAAG
--CWGGCGGGAA-
 C T A G A C T G A G T C T C G A C T A G A C T G A G T C C G T A C T A G C T A G G T C A C G T A A C T G
A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGCAGGCAGGAAG-
----ANCAGGAAGT
 C T A G A C T G A G T C T C G A C T A G A C T G A G T C C G T A C T A G C T A G G T C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGCAGGCAGGAAG-
----AACAGGAAGT
 C T A G A C T G A G T C T C G A C T A G A C T G A G T C C G T A C T A G C T A G G T C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCAGGCAGGAAG
TBGCACGCAA----
 A C G T C T A G A C T G A G T C T C G A C T A G A C T G A G T C C G T A C T A G C T A G G T C A C G T A A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGCAGGCAGGAAG
--AAGGCAAGTGT
 C T A G A C T G A G T C T C G A C T A G A C T G A G T C C G T A C T A G C T A G G T C A C G T A A C T G
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCAGGCAGGAAG-
----AACCGGAAGT
 C T A G A C T G A G T C T C G A C T A G A C T G A G T C C G T A C T A G C T A G G T C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T