Information for 3-CCCAAGGDHDVTG (Motif 8)

A G T C A G T C A G T C C G T A C G T A A C T G C T A G C G T A G A T C C G T A T G A C C G A T A T C G
Reverse Opposite:
A T G C C G T A A C T G G A C T C A T G G A C T A G T C A G T C C G A T A C G T A C T G C T A G A C T G
p-value:1e-8
log p-value:-1.904e+01
Information Content per bp:1.717
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif52.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets61.8 +/- 32.4bp
Average Position of motif in Background53.2 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCCAAGGDHDVTG
NTCAAGGTCA---
 A G T C A G T C A G T C C G T A C G T A A C T G C T A G C G T A G A T C C G T A T G A C C G A T A T C G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCCAAGGDHDVTG
BTCAAGGTCA---
 A G T C A G T C A G T C C G T A C G T A A C T G C T A G C G T A G A T C C G T A T G A C C G A T A T C G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCAAGGDHDVTG
GTCCCCAGGGGA----
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A A C T G C T A G C G T A G A T C C G T A T G A C C G A T A T C G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCAAGGDHDVTG
--CAAGGHCANV-
 A G T C A G T C A G T C C G T A C G T A A C T G C T A G C G T A G A T C C G T A T G A C C G A T A T C G
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCAAGGDHDVTG
NGTCCCNNGGGA----
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A A C T G C T A G C G T A G A T C C G T A T G A C C G A T A T C G
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCAAGGDHDVTG
AAGTTCAAGGTCAGC-
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A A C T G C T A G C G T A G A T C C G T A T G A C C G A T A T C G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

Znf423/MA0116.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCAAGGDHDVTG
GGCACCCAGGGGTGC--
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A A C T G C T A G C G T A G A T C C G T A T G A C C G A T A T C G
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCAAGGDHDVTG
ATTCCCAAGGGAAT--
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A A C T G C T A G C G T A G A T C C G T A T G A C C G A T A T C G
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCCAAGGDHDVTG
-TCAAGGTCAN--
 A G T C A G T C A G T C C G T A C G T A A C T G C T A G C G T A G A T C C G T A T G A C C G A T A T C G
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCAAGGDHDVTG
-TCAAGGTCATA-
 A G T C A G T C A G T C C G T A C G T A A C T G C T A G C G T A G A T C C G T A T G A C C G A T A T C G
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T