Information for 25-GCTCTCCTTTCAC (Motif 53)

A C T G A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G A G T C
p-value:1e0
log p-value:-4.221e-01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif68.75%
Number of Background Sequences with motif27634.4
Percentage of Background Sequences with motif69.88%
Average Position of motif in Targets92.0 +/- 0.0bp
Average Position of motif in Background50.0 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCTCTCCTTTCAC----
-----ACTTTCACTTTC
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTCTCCTTTCAC-
NNGCACCTTTCTCC
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A G T C C G T A A G T C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCTCTCCTTTCAC-----
---TCACTTTCACTTTCN
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

Nr2f6/MA0677.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTCTCCTTTCAC---
--TGACCTTTGACCTN
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

Rxra/MA0512.2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCTCTCCTTTCAC---
--TGACCTTTGACCCC
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCTCTCCTTTCAC---
--TGACCTTTGACCTC
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCTCTCCTTTCAC---
--TGACCTTTGACCCC
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCTCTCCTTTCAC---
--TGACCTTTGACCCC
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCTCTCCTTTCAC----
--TGACCTTTGCCCTAN
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTCCTTTCAC
GKMTCADRTTWC--
 A C G T A C T G A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A G T C C G T A A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T