Information for 19-CAGACGTATC (Motif 50)

A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A G T C A C T G A C G T A G T C A C G T A C T G
p-value:1e-3
log p-value:-7.120e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CAGACGTATC
CCAGACRSVB-
 A C G T A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A A C G T A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGACGTATC
CCAGACAG---
 A C G T A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A A C G T A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CAGACGTATC-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A A C G T A G T C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGACGTATC---
--AATGTATCAAT
 A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Atf1/MA0604.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGACGTATC
ATGACGTA--
 A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A A C G T A G T C
T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGACGTATC
-TGACGT---
 A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A A C G T A G T C
A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAGACGTATC
CATCCAGATGTTC-
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A A C G T A G T C
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T

XBP1/MA0844.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGACGTATC---
GATGACGTGGCANT
 A C G T A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

Gmeb1/MA0615.1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAGACGTATC---
NNNTNGTACGTAANNNN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAGACGTATC---
NNNTNGTACGTAANNNN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C