Information for 17-TCGCTGAACT (Motif 48)

A C G T A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A
p-value:1e-3
log p-value:-7.120e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background43.1 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCGCTGAACT-
NANTTCATTGAATTA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

Vdr/MA0693.1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCGCTGAACT-
TGAACTCNATGAACTC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C G T A C G T
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCGCTGAACT
AATTTGCTGAC--
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCGCTGAACT---
---CTGACCTTTG
 A C G T A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCGCTGAACT
-NGCTN----
 A C G T A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C G T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCGCTGAACT
TGACCTTGACCT
 A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCGCTGAACT--
----TGACCTYA
 A C G T A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RARA::RXRA/MA0159.1/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------TCGCTGAACT
TGACCTCTCNNTGACCT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCGCTGAACT
----TGACCT
 A C G T A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCGCTGAACT---
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G