Information for 24-CCAGGGAGGCTTGGAA (Motif 46)

A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C A G T C A C G T A G T C A G T C A G T C A C G T A C T G A C T G
p-value:1e-3
log p-value:-7.813e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAGGGAGGCTTGGAA
SCAGYCADGCATGAC-
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGGGAGGCTTGGAA----
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CCAGGGAGGCTTGGAA
------AGGCCTNG--
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCAGGGAGGCTTGGAA
GCAGCCAAGCGTGACN
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCAGGGAGGCTTGGAA--
---RGSMTBCTGGGAAAT
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CCAGGGAGGCTTGGAA
------AAGCTTG---
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCAGGGAGGCTTGGAA
--AAGGGGGCGTGGCC
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A
A C G T A C G T C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.49
Offset:11
Orientation:reverse strand
Alignment:CCAGGGAGGCTTGGAA--
-----------TGGAAAA
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:CCAGGGAGGCTTGGAA---
---------NNTGGAAANN
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

KLF16/MA0741.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CCAGGGAGGCTTGGAA
----GGGGGCGTGGC-
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A
A C G T A C G T A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C A C G T