Information for 15-TTCHBTTGDGADBAAT (Motif 20)

A G C T G A C T G T A C G A C T A C T G G C A T C A G T A T C G C G T A A C T G C T G A C G A T A C T G T C G A C G T A G C A T
Reverse Opposite:
C G T A G C A T A G C T T A G C G C A T G A C T T G A C G C A T T A G C G C T A C G T A T A G C C T G A C A T G C T G A T C G A
p-value:1e-6
log p-value:-1.523e+01
Information Content per bp:1.644
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif30.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets37.0 +/- 19.3bp
Average Position of motif in Background56.7 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTCHBTTGDGADBAAT
ANTCCCTNGGGAAT---
 A C G T A G C T G A C T G T A C G A C T A C T G G C A T C A G T A T C G C G T A A C T G C T G A C G A T A C T G T C G A C G T A G C A T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTCHBTTGDGADBAAT--
----NTTNAGAACAATTA
 A G C T G A C T G T A C G A C T A C T G G C A T C A G T A T C G C G T A A C T G C T G A C G A T A C T G T C G A C G T A G C A T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTCHBTTGDGADBAAT
NGTCCCNNGGGA-----
 A C G T A G C T G A C T G T A C G A C T A C T G G C A T C A G T A T C G C G T A A C T G C T G A C G A T A C T G T C G A C G T A G C A T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TTCHBTTGDGADBAAT-----
-----TTTAGAACAATAAAAT
 A G C T G A C T G T A C G A C T A C T G G C A T C A G T A T C G C G T A A C T G C T G A C G A T A C T G T C G A C G T A G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTCHBTTGDGADBAAT---
-ACATCTGGWWTYAATTAR
 A G C T G A C T G T A C G A C T A C T G G C A T C A G T A T C G C G T A A C T G C T G A C G A T A C T G T C G A C G T A G C A T A C G T A C G T A C G T
A C G T T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

ZNF410/MA0752.1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TTCHBTTGDGADBAAT
GANTATTATGGGATGGA-
 A C G T A C G T A G C T G A C T G T A C G A C T A C T G G C A T C A G T A T C G C G T A A C T G C T G A C G A T A C T G T C G A C G T A G C A T
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TTCHBTTGDGADBAAT
NNTTCCTTTGATCTNNA-
 A C G T A C G T A G C T G A C T G T A C G A C T A C T G G C A T C A G T A T C G C G T A A C T G C T G A C G A T A C T G T C G A C G T A G C A T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TTCHBTTGDGADBAAT----
----NNTNANAACAATTNNA
 A G C T G A C T G T A C G A C T A C T G G C A T C A G T A T C G C G T A A C T G C T G A C G A T A C T G T C G A C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TTCHBTTGDGADBAAT------
-----TAGTGAACAATAGATTT
 A G C T G A C T G T A C G A C T A C T G G C A T C A G T A T C G C G T A A C T G C T G A C G A T A C T G T C G A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:forward strand
Alignment:TTCHBTTGDGADBAAT-----
-----TTAAGAACAATAAATT
 A G C T G A C T G T A C G A C T A C T G G C A T C A G T A T C G C G T A A C T G C T G A C G A T A C T G T C G A C G T A G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T