Information for 1-GGGAGAAAGA (Motif 9)

A C T G C T A G A T C G C T G A A T C G C T G A C T G A C G T A A C T G C T G A
Reverse Opposite:
A G C T G T A C C G A T A G C T A G C T A T G C A G C T A T G C A G T C A G T C
p-value:1e-8
log p-value:-1.887e+01
Information Content per bp:1.798
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif7.36%
Number of Background Sequences with motif292.1
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets49.6 +/- 28.9bp
Average Position of motif in Background48.8 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGAGAAAGA
GGCGGGAARN-
 A C G T A C T G C T A G A T C G C T G A A T C G C T G A C T G A C G T A A C T G C T G A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGAAAGA
TGGCGGGAAAHB
 A C G T A C G T A C T G C T A G A T C G C T G A A T C G C T G A C T G A C G T A A C T G C T G A
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGAGAAAGA
GGAACAAAGR
 A C T G C T A G A T C G C T G A A T C G C T G A C T G A C G T A A C T G C T G A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAGAAAGA
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A T C G C T G A A T C G C T G A C T G A C G T A A C T G C T G A
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGAAAGA---
TGGGGCAAAGGTCA
 A C G T A C T G C T A G A T C G C T G A A T C G C T G A C T G A C G T A A C T G C T G A A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGGAGAAAGA
GGGCGGGAAGG-
 A C G T A C G T A C T G C T A G A T C G C T G A A T C G C T G A C T G A C G T A A C T G C T G A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGAGAAAGA
GGCGGGAAAH-
 A C G T A C T G C T A G A T C G C T G A A T C G C T G A C T G A C G T A A C T G C T G A
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGAAAGA
CSTGGGAAAD-
 A C G T A C T G C T A G A T C G C T G A A T C G C T G A C T G A C G T A A C T G C T G A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGGAGAAAGA
CWGGCGGGAA---
 A C G T A C G T A C G T A C T G C T A G A T C G C T G A A T C G C T G A C T G A C G T A A C T G C T G A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGGAGAAAGA
GGAGGGGGAA---
 A C G T A C G T A C G T A C T G C T A G A T C G C T G A A T C G C T G A C T G A C G T A A C T G C T G A
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T