Information for 2-CTTACTASTTWWC (Motif 6)

A G T C G A C T A G C T T G C A A G T C A C G T C G T A A T C G A C G T A C G T G C A T C G A T G T A C
Reverse Opposite:
A C T G G C T A C G T A C G T A T C G A A T G C C G A T C G T A A C T G A C G T T C G A C G T A C T A G
p-value:1e-9
log p-value:-2.162e+01
Information Content per bp:1.627
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif9.20%
Number of Background Sequences with motif413.4
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets54.1 +/- 27.2bp
Average Position of motif in Background50.9 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTTACTASTTWWC--
TTTTACGACTTTCCAT
 A C G T A G T C G A C T A G C T T G C A A G T C A C G T C G T A A T C G A C G T A C G T G C A T C G A T G T A C A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTTACTASTTWWC
-TTAATNATTAAC
 A G T C G A C T A G C T T G C A A G T C A C G T C G T A A T C G A C G T A C G T G C A T C G A T G T A C
A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTTACTASTTWWC
---ACTAGTTAAC
 A G T C G A C T A G C T T G C A A G T C A C G T C G T A A T C G A C G T A C G T G C A T C G A T G T A C
A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTTACTASTTWWC
----CTAATTAA-
 A G T C G A C T A G C T T G C A A G T C A C G T C G T A A T C G A C G T A C G T G C A T C G A T G T A C
A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTACTASTTWWC-
-TTAATGTTTAACC
 A G T C G A C T A G C T T G C A A G T C A C G T C G T A A T C G A C G T A C G T G C A T C G A T G T A C A C G T
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTTACTASTTWWC
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A G T C G A C T A G C T T G C A A G T C A C G T C G T A A T C G A C G T A C G T G C A T C G A T G T A C
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTACTASTTWWC
TACTTCCTCTTTTN-
 A C G T A C G T A G T C G A C T A G C T T G C A A G T C A C G T C G T A A T C G A C G T A C G T G C A T C G A T G T A C
C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTACTASTTWWC---
NTTCGCTAATTAGCTNT
 A C G T A G T C G A C T A G C T T G C A A G T C A C G T C G T A A T C G A C G T A C G T G C A T C G A T G T A C A C G T A C G T A C G T
G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T

PH0154.1_Prrx1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTTACTASTTWWC----
GTAACTAATTAACTACT
 A G T C G A C T A G C T T G C A A G T C A C G T C G T A A T C G A C G T A C G T G C A T C G A T G T A C A C G T A C G T A C G T A C G T
T A C G A C G T G T C A T C G A A G T C G A C T T C G A C T G A A G C T A G C T C T G A T C G A A G T C C A G T C T G A T A G C A G C T

PH0051.1_Hoxa4/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTTACTASTTWWC---
GATTATTAATTAACTTG
 A C G T A G T C G A C T A G C T T G C A A G T C A C G T C G T A A T C G A C G T A C G T G C A T C G A T G T A C A C G T A C G T A C G T
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G