Information for 11-TGTTTGGCGCTTG (Motif 20)

A C G T A C T G A C G T C G A T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C G T C A C G T A A C T G A G T C A C T G A G T C A G T C C G T A C G T A G T C A A G T C C G T A
p-value:1e-5
log p-value:-1.162e+01
Information Content per bp:1.940
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 22.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGTTTGGCGCTTG-
--TTTGGCGCCAAA
 A C G T A C T G A C G T C G A T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C T G A C G T
A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGTTTGGCGCTTG
--NTTGGCANN--
 A C G T A C T G A C G T C G A T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C T G
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTGGCGCTTG---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C T G A C G T C G A T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGTTTGGCGCTTG
---TTGGCA----
 A C G T A C T G A C G T C G A T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C T G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTGGCGCTTG---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C T G A C G T C G A T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTTTGGCGCTTG
TGTCTGDCACCT-
 A C G T A C T G A C G T C G A T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C T G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTGGCGCTTG
NNCTTTGTTTTGNTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G A T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C T G
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGTTTGGCGCTTG
-DTTTCCCGCC--
 A C G T A C T G A C G T C G A T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C T G
A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGTTTGGCGCTTG
CTGTCTGTCACCT-
 A C G T A C G T A C T G A C G T C G A T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C T G
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTGGCGCTTG-
CTGATTGGTCNATTT
 A C G T A C G T A C T G A C G T C G A T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C T G A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T