Information for 9-TCGCACVCACACT (Motif 17)

G A C T A T G C A C T G A T G C C G T A A G T C T C A G G T A C C G T A T A G C T C G A G A T C C G A T
Reverse Opposite:
C G T A C A T G A C G T A C T G A C G T A C T G A G T C C T A G A C G T A T C G A G T C A T C G C T G A
p-value:1e-7
log p-value:-1.675e+01
Information Content per bp:1.723
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif4.29%
Number of Background Sequences with motif77.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets54.2 +/- 12.5bp
Average Position of motif in Background53.7 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TCGCACVCACACT-
AGCGGCACACACGCAA
 A C G T A C G T G A C T A T G C A C T G A T G C C G T A A G T C T C A G G T A C C G T A T A G C T C G A G A T C C G A T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TCGCACVCACACT
TBGCACGCAA---
 G A C T A T G C A C T G A T G C C G T A A G T C T C A G G T A C C G T A T A G C T C G A G A T C C G A T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCGCACVCACACT-
CGAAGCACACAAAATA
 A C G T A C G T G A C T A T G C A C T G A T G C C G T A A G T C T C A G G T A C C G T A T A G C T C G A G A T C C G A T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCGCACVCACACT
---CRCCCACGCA
 G A C T A T G C A C T G A T G C C G T A A G T C T C A G G T A C C G T A T A G C T C G A G A T C C G A T
A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCGCACVCACACT
---CACGCA----
 G A C T A T G C A C T G A T G C C G T A A G T C T C A G G T A C C G T A T A G C T C G A G A T C C G A T
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCGCACVCACACT
-YCCGCCCACGCN
 G A C T A T G C A C T G A T G C C G T A A G T C T C A G G T A C C G T A T A G C T C G A G A T C C G A T
A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCGCACVCACACT
--GCACGTAY---
 G A C T A T G C A C T G A T G C C G T A A G T C T C A G G T A C C G T A T A G C T C G A G A T C C G A T
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCGCACVCACACT-
--GGACACACCCCC
 G A C T A T G C A C T G A T G C C G T A A G T C T C A G G T A C C G T A T A G C T C G A G A T C C G A T A C G T
A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCGCACVCACACT
-BGCACGTA----
 G A C T A T G C A C T G A T G C C G T A A G T C T C A G G T A C C G T A T A G C T C G A G A T C C G A T
A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCGCACVCACACT
--GCACGTACCC-
 G A C T A T G C A C T G A T G C C G T A A G T C T C A G G T A C C G T A T A G C T C G A G A T C C G A T
A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T