Information for 5-GATGTAARTGCAG (Motif 10)

A C T G C T G A A C G T A C T G A C G T C G T A C T G A T C A G A C G T A C T G G T A C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C C G T A A G C T A G C T A C G T C G T A A G T C C G T A A G C T A G T C
p-value:1e-7
log p-value:-1.819e+01
Information Content per bp:1.878
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 22.3bp
Average Position of motif in Background59.2 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GATGTAARTGCAG
AGGACGCTGTAAAGGGA-
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T C G T A C T G A T C A G A C G T A C T G G T A C C G T A A C T G
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GATGTAARTGCAG
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T C G T A C T G A T C A G A C G T A C T G G T A C C G T A A C T G
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GATGTAARTGCAG
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C G T A C T G A C G T C G T A C T G A T C A G A C G T A C T G G T A C C G T A A C T G
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GATGTAARTGCAG
ATGATGCAAT-----
 A C G T A C G T A C T G C T G A A C G T A C T G A C G T C G T A C T G A T C A G A C G T A C T G G T A C C G T A A C T G
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GATGTAARTGCAG
ATATGCAAATNNN-
 A C G T A C T G C T G A A C G T A C T G A C G T C G T A C T G A T C A G A C G T A C T G G T A C C G T A A C T G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GATGTAARTGCAG
WATGCAAATGAG-
 A C T G C T G A A C G T A C T G A C G T C G T A C T G A T C A G A C G T A C T G G T A C C G T A A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GATGTAARTGCAG
MTGATGCAAT-----
 A C G T A C G T A C T G C T G A A C G T A C T G A C G T C G T A C T G A T C A G A C G T A C T G G T A C C G T A A C T G
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GATGTAARTGCAG
---TTAAGTGC--
 A C T G C T G A A C G T A C T G A C G T C G T A C T G A T C A G A C G T A C T G G T A C C G T A A C T G
A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GATGTAARTGCAG
TATGCWAATBAV-
 A C T G C T G A A C G T A C T G A C G T C G T A C T G A T C A G A C G T A C T G G T A C C G T A A C T G
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T

GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GATGTAARTGCAG------
AGATSTNDNNDSAGATAASN
 A C G T A C T G C T G A A C G T A C T G A C G T C G T A C T G A T C A G A C G T A C T G G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A A C T G C G T A A C G T A T C G C A G T T A G C C G T A T C G A G T A C C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A T C G G C T A