Information for 2-CTAACVCTAA (Motif 8)

A G T C A C G T C G T A C G T A A G T C T A C G A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G A T G C A C T G A C G T A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.014e+01
Information Content per bp:1.934
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.3 +/- 9.7bp
Average Position of motif in Background30.8 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTAACVCTAA---
NNNTAACAATTATAN
 A C G T A C G T A G T C A C G T C G T A C G T A A G T C T A C G A G T C A C G T C G T A C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTAACVCTAA
--AACCGANA
 A G T C A C G T C G T A C G T A A G T C T A C G A G T C A C G T C G T A C G T A
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTAACVCTAA
GCTAATCC---
 A C G T A G T C A C G T C G T A C G T A A G T C T A C G A G T C A C G T C G T A C G T A
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTAACVCTAA-----
-----GCTAATTGCT
 A G T C A C G T C G T A C G T A A G T C T A C G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

HOXA5/MA0158.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTAACVCTAA--
----CACTAATT
 A G T C A C G T C G T A C G T A A G T C T A C G A G T C A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTAACVCTAA
-TAATCCCN-
 A G T C A C G T C G T A C G T A A G T C T A C G A G T C A C G T C G T A C G T A
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTAACVCTAA
-NAACAAT--
 A G T C A C G T C G T A C G T A A G T C T A C G A G T C A C G T C G T A C G T A
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PH0107.1_Msx2/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTAACVCTAA---------
--ANCGCTAATTGGTCTNN
 A G T C A C G T C G T A C G T A A G T C T A C G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

PH0094.1_Lhx4/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTAACVCTAA--------
-CAAAGCTAATTAGNTTN
 A G T C A C G T C G T A C G T A A G T C T A C G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTAACVCTAA
YTAATCCY--
 A G T C A C G T C G T A C G T A A G T C T A C G A G T C A C G T C G T A C G T A
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T