Information for 1-GCAAATGTCA (Motif 7)

A C T G A G T C C G T A C T G A C G T A A G C T C T A G A C G T A G T C C T G A
Reverse Opposite:
A G C T A C T G C G T A A G T C C T G A A C G T A G C T A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.053e+01
Information Content per bp:1.927
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif50.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets31.2 +/- 34.2bp
Average Position of motif in Background44.2 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GCAAATGTCA
ANGNAAAGGTCA
 A C G T A C G T A C T G A G T C C G T A C T G A C G T A A G C T C T A G A C G T A G T C C T G A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCAAATGTCA----
TCTCAAAGGTCACCTG
 A C G T A C G T A C T G A G T C C G T A C T G A C G T A A G C T C T A G A C G T A G T C C T G A A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCAAATGTCA-
-CAAAGGTCAG
 A C T G A G T C C G T A C T G A C G T A A G C T C T A G A C G T A G T C C T G A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCAAATGTCA----
TCTCAAAGGTCACGAG
 A C G T A C G T A C T G A G T C C G T A C T G A C G T A A G C T C T A G A C G T A G T C C T G A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GCAAATGTCA
TAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C T G A C G T A A G C T C T A G A C G T A G T C C T G A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCAAATGTCA
TGGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C T G A C G T A A G C T C T A G A C G T A G T C C T G A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCAAATGTCA----
-CAAAGGTCAAGGG
 A C T G A G T C C G T A C T G A C G T A A G C T C T A G A C G T A G T C C T G A A C G T A C G T A C G T A C G T
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GCAAATGTCA-
----NTGTCAN
 A C T G A G T C C G T A C T G A C G T A A G C T C T A G A C G T A G T C C T G A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCAAATGTCA-
--AAAAGTCAA
 A C T G A G T C C G T A C T G A C G T A A G C T C T A G A C G T A G T C C T G A A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCAAATGTCA
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C T G A C G T A A G C T C T A G A C G T A G T C C T G A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A