Information for 1-ACWGRAYYTTSCT (Motif 5)

C G T A G T A C C G A T A C T G C T A G C G T A A G C T A G T C A C G T A C G T A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C C G T A C G T A C T A G C T G A C G A T G A T C A G T C G C A T A C T G A C G T
p-value:1e-5
log p-value:-1.291e+01
Information Content per bp:1.848
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.7 +/- 32.6bp
Average Position of motif in Background69.9 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACWGRAYYTTSCT
AACACTGCACATTGTT
 A C G T A C G T A C G T C G T A G T A C C G A T A C T G C T A G C G T A A G C T A G T C A C G T A C G T A T C G A G T C A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACWGRAYYTTSCT
--GGGAATTTCC-
 C G T A G T A C C G A T A C T G C T A G C G T A A G C T A G T C A C G T A C G T A T C G A G T C A C G T
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACWGRAYYTTSCT
--GGGGATTTCC-
 C G T A G T A C C G A T A C T G C T A G C G T A A G C T A G T C A C G T A C G T A T C G A G T C A C G T
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACWGRAYYTTSCT
-CAGCTGTTTCCT
 C G T A G T A C C G A T A C T G C T A G C G T A A G C T A G T C A C G T A C G T A T C G A G T C A C G T
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACWGRAYYTTSCT
--GGGAATTTCC-
 C G T A G T A C C G A T A C T G C T A G C G T A A G C T A G T C A C G T A C G T A T C G A G T C A C G T
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACWGRAYYTTSCT----
--TGGACTTTGNNCTCN
 C G T A G T A C C G A T A C T G C T A G C G T A A G C T A G T C A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACWGRAYYTTSCT-
NNATTGGACTTTNGNN
 A C G T A C G T C G T A G T A C C G A T A C T G C T A G C G T A A G C T A G T C A C G T A C G T A T C G A G T C A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:ACWGRAYYTTSCT---
------ACTTCCTGBT
 C G T A G T A C C G A T A C T G C T A G C G T A A G C T A G T C A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACWGRAYYTTSCT
GVACAGNMTGTYCTB
 A C G T A C G T C G T A G T A C C G A T A C T G C T A G C G T A A G C T A G T C A C G T A C G T A T C G A G T C A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACWGRAYYTTSCT-----
--TGGACTTTGNNCTNTG
 C G T A G T A C C G A T A C T G C T A G C G T A A G C T A G T C A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G