Information for 10-TYCAGTMTGN (Motif 46)

A C G T G A T C A G T C C G T A C A T G A C G T G T A C A C G T C T A G C G T A
Reverse Opposite:
G C A T A G T C G T C A A C T G T G C A G T A C C G A T A C T G C T A G T G C A
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.635
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.95%
Number of Background Sequences with motif1216.4
Percentage of Background Sequences with motif2.58%
Average Position of motif in Targets43.9 +/- 26.6bp
Average Position of motif in Background49.2 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TYCAGTMTGN----
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A C G T G A T C A G T C C G T A C A T G A C G T G T A C A C G T C T A G C G T A A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TYCAGTMTGN---
CTTTCANTATGACTV
 A C G T A C G T A C G T G A T C A G T C C G T A C A T G A C G T G T A C A C G T C T A G C G T A A C G T A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TYCAGTMTGN
--TWGTCTGV
 A C G T G A T C A G T C C G T A C A T G A C G T G T A C A C G T C T A G C G T A
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TYCAGTMTGN
--CTGTCTGG
 A C G T G A T C A G T C C G T A C A T G A C G T G T A C A C G T C T A G C G T A
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

POL002.1_INR/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TYCAGTMTGN
-TCAGTCTT-
 A C G T G A T C A G T C C G T A C A T G A C G T G T A C A C G T C T A G C G T A
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TYCAGTMTGN-
-RCCATMTGTT
 A C G T G A T C A G T C C G T A C A T G A C G T G T A C A C G T C T A G C G T A A C G T
A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TYCAGTMTGN
VBSYGTCTGG
 A C G T G A T C A G T C C G T A C A T G A C G T G T A C A C G T C T A G C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TYCAGTMTGN--
--CCTGCTGAGH
 A C G T G A T C A G T C C G T A C A T G A C G T G T A C A C G T C T A G C G T A A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TYCAGTMTGN----
GVACAGNMTGTYCTB
 A C G T A C G T G A T C A G T C C G T A C A T G A C G T G T A C A C G T C T A G C G T A A C G T A C G T A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

Neurog1/MA0623.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TYCAGTMTGN-
-ACCATATGGT
 A C G T G A T C A G T C C G T A C A T G A C G T G T A C A C G T C T A G C G T A A C G T
A C G T C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T