Information for 17-CTGAMCWTAYTMG (Motif 35)

A G T C A C G T A C T G C G T A G T A C A G T C C G A T A C G T C G T A A G T C A C G T G T C A A C T G
Reverse Opposite:
A G T C C A G T C G T A C T A G A C G T G T C A C G T A A C T G A C T G A C G T A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.874
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.2 +/- 20.4bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGAMCWTAYTMG
-TGACCTYA----
 A G T C A C G T A C T G C G T A G T A C A G T C C G A T A C G T C G T A A G T C A C G T G T C A A C T G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGAMCWTAYTMG
-TGACCTTGAT--
 A G T C A C G T A C T G C G T A G T A C A G T C C G A T A C G T C G T A A G T C A C G T G T C A A C T G
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGAMCWTAYTMG
GTGACCTT-----
 A G T C A C G T A C T G C G T A G T A C A G T C C G A T A C G T C G T A A G T C A C G T G T C A A C T G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGAMCWTAYTMG
-TGACCT------
 A G T C A C G T A C T G C G T A G T A C A G T C C G A T A C G T C G T A A G T C A C G T G T C A A C T G
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGAMCWTAYTMG
-TGACCTARTT--
 A G T C A C G T A C T G C G T A G T A C A G T C C G A T A C G T C G T A A G T C A C G T G T C A A C T G
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGAMCWTAYTMG
NTGACCTTGA---
 A G T C A C G T A C T G C G T A G T A C A G T C C G A T A C G T C G T A A G T C A C G T G T C A A C T G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGAMCWTAYTMG
CTGACCTTTG---
 A G T C A C G T A C T G C G T A G T A C A G T C C G A T A C G T C G T A A G T C A C G T G T C A A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGAMCWTAYTMG-
TTGACCTANTTATN
 A G T C A C G T A C T G C G T A G T A C A G T C C G A T A C G T C G T A A G T C A C G T G T C A A C T G A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGAMCWTAYTMG
ATGACCTTGA---
 A G T C A C G T A C T G C G T A G T A C A G T C C G A T A C G T C G T A A G T C A C G T G T C A A C T G
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGAMCWTAYTMG
-TGACCYCT----
 A G T C A C G T A C T G C G T A G T A C A G T C C G A T A C G T C G T A A G T C A C G T G T C A A C T G
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T