Information for 2-GTTAAAGGGT (Motif 21)

C T A G A C G T A C G T G T C A C T G A C T G A C A T G C T A G T A C G A C G T
Reverse Opposite:
C G T A A T G C A G T C G T A C G A C T A G C T A C G T G T C A C G T A G A T C
p-value:1e-9
log p-value:-2.250e+01
Information Content per bp:1.832
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif87.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets54.9 +/- 31.6bp
Average Position of motif in Background53.8 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTTAAAGGGT
GCTAAACGGT
 C T A G A C G T A C G T G T C A C T G A C T G A C A T G C T A G T A C G A C G T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

MYBL2/MA0777.1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTTAAAGGGT-
GACNGTTTAACGGTT
 A C G T A C G T A C G T A C G T C T A G A C G T A C G T G T C A C T G A C T G A C A T G C T A G T A C G A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTTAAAGGGT
GCTAATTGCT
 C T A G A C G T A C G T G T C A C T G A C T G A C A T G C T A G T A C G A C G T
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTAAAGGGT
GTTAATGGCC
 C T A G A C G T A C G T G T C A C T G A C T G A C A T G C T A G T A C G A C G T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

MYBL1/MA0776.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTTAAAGGGT
ACCGTTAACGGT-
 A C G T A C G T A C G T C T A G A C G T A C G T G T C A C T G A C T G A C A T G C T A G T A C G A C G T
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTTAAAGGGT----
NNNTTAATTGGTTTTT
 A C G T A C G T C T A G A C G T A C G T G T C A C T G A C T G A C A T G C T A G T A C G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTTAAAGGGT---
AAGGTCAAAAGGTCAA
 A C G T A C G T A C G T C T A G A C G T A C G T G T C A C T G A C T G A C A T G C T A G T A C G A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTTAAAGGGT
-CTAATCGNT
 C T A G A C G T A C G T G T C A C T G A C T G A C A T G C T A G T A C G A C G T
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GTTAAAGGGT--
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T G T C A C T G A C T G A C A T G C T A G T A C G A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

PH0088.1_Isl2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTAAAGGGT----
AAATTAATTGATTTNG
 A C G T A C G T C T A G A C G T A C G T G T C A C T G A C T G A C A T G C T A G T A C G A C G T A C G T A C G T A C G T A C G T
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G