Information for 9-GCCTSAGGCMCAS (Motif 20)

C T A G A G T C A G T C A C G T A T C G C G T A C T A G C T A G G T A C G T C A G T A C G C T A T A C G
Reverse Opposite:
A T G C C G A T A C T G A C G T A C T G A G T C G A T C C G A T A T G C C G T A A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.751
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif44.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets34.1 +/- 23.0bp
Average Position of motif in Background55.0 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GCCTSAGGCMCAS
CGCCTCAGGCA---
 A C G T C T A G A G T C A G T C A C G T A T C G C G T A C T A G C T A G G T A C G T C A G T A C G C T A T A C G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GCCTSAGGCMCAS
AGCCTCAGGCA---
 A C G T C T A G A G T C A G T C A C G T A T C G C G T A C T A G C T A G G T A C G T C A G T A C G C T A T A C G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GCCTSAGGCMCAS
AGCCTCAGGCA---
 A C G T C T A G A G T C A G T C A C G T A T C G C G T A C T A G C T A G G T A C G T C A G T A C G C T A T A C G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GCCTSAGGCMCAS
NTNGCCTCAGGCNNN-
 A C G T A C G T A C G T C T A G A G T C A G T C A C G T A T C G C G T A C T A G C T A G G T A C G T C A G T A C G C T A T A C G
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GCCTSAGGCMCAS
ATTGCCTCAGGCAAT-
 A C G T A C G T A C G T C T A G A G T C A G T C A C G T A T C G C G T A C T A G C T A G G T A C G T C A G T A C G C T A T A C G
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCCTSAGGCMCAS
SCCTSAGGSCAW-
 C T A G A G T C A G T C A C G T A T C G C G T A C T A G C T A G G T A C G T C A G T A C G C T A T A C G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCCTSAGGCMCAS
GCCTCAGGGCAT-
 C T A G A G T C A G T C A C G T A T C G C G T A C T A G C T A G G T A C G T C A G T A C G C T A T A C G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GCCTSAGGCMCAS
NTCGCCTCAGGCAAT-
 A C G T A C G T A C G T C T A G A G T C A G T C A C G T A T C G C G T A C T A G C T A G G T A C G T C A G T A C G C T A T A C G
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCCTSAGGCMCAS
NTCCCCTCAGGGANT-
 A C G T A C G T A C G T C T A G A G T C A G T C A C G T A T C G C G T A C T A G C T A G G T A C G T C A G T A C G C T A T A C G
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCTSAGGCMCAS
CCACCTGTTGCAT--
 A C G T A C G T C T A G A G T C A G T C A C G T A T C G C G T A C T A G C T A G G T A C G T C A G T A C G C T A T A C G
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T