Information for 5-GCYGCATTGCAKCTGC (Motif 10)

A C T G G T A C A G C T C T A G A G T C C T G A C A G T A G C T A C T G A G T C G T C A A C G T T A G C C G A T T A C G G T A C
Reverse Opposite:
A C T G A G T C C G T A A C T G T G C A A C G T A C T G G T A C T C G A G T C A A G C T T C A G A G T C T C G A A C T G A G T C
p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.669
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif41.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets50.6 +/- 19.2bp
Average Position of motif in Background49.9 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.67
Offset:7
Orientation:forward strand
Alignment:GCYGCATTGCAKCTGC-
-------CGCAGCTGCG
 A C T G G T A C A G C T C T A G A G T C C T G A C A G T A G C T A C T G A G T C G T C A A C G T T A G C C G A T T A C G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCYGCATTGCAKCTGC
--GGGATTGCATNN--
 A C T G G T A C A G C T C T A G A G T C C T G A C A G T A G C T A C T G A G T C G T C A A C G T T A G C C G A T T A C G G T A C
A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GCYGCATTGCAKCTGC---
-------NVCAGCTGBBNN
 A C T G G T A C A G C T C T A G A G T C C T G A C A G T A G C T A C T G A G T C G T C A A C G T T A G C C G A T T A C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCYGCATTGCAKCTGC-----
----CTCAGCAGCTGCTACTG
 A C T G G T A C A G C T C T A G A G T C C T G A C A G T A G C T A C T G A G T C G T C A A C G T T A G C C G A T T A C G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GCYGCATTGCAKCTGC
------NNACAGCTGC
 A C T G G T A C A G C T C T A G A G T C C T G A C A G T A G C T A C T G A G T C G T C A A C G T T A G C C G A T T A C G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GCYGCATTGCAKCTGC--
------SNGCACCTGCHS
 A C T G G T A C A G C T C T A G A G T C C T G A C A G T A G C T A C T G A G T C G T C A A C G T T A G C C G A T T A C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GCYGCATTGCAKCTGC----
-------TGCAGCTGTCCCT
 A C T G G T A C A G C T C T A G A G T C C T G A C A G T A G C T A C T G A G T C G T C A A C G T T A G C C G A T T A C G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GCYGCATTGCAKCTGC-
-------AGCAGCTGCT
 A C T G G T A C A G C T C T A G A G T C C T G A C A G T A G C T A C T G A G T C G T C A A C G T T A G C C G A T T A C G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GCYGCATTGCAKCTGC-
------NNGCAGCTGTC
 A C T G G T A C A G C T C T A G A G T C C T G A C A G T A G C T A C T G A G T C G T C A A C G T T A G C C G A T T A C G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.61
Offset:8
Orientation:forward strand
Alignment:GCYGCATTGCAKCTGC--
--------NCAGCTGCTG
 A C T G G T A C A G C T C T A G A G T C C T G A C A G T A G C T A C T G A G T C G T C A A C G T T A G C C G A T T A C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G