Information for 3-CAGMGGACAGGCACGC (Motif 8)

A G T C C T G A A C T G G T A C C T A G T A C G T G C A T A G C C G T A A C T G A T C G A T G C C T G A A G T C C A T G A G T C
Reverse Opposite:
A C T G G A T C A C T G A G C T A T C G A T G C A G T C A C G T A C T G A C G T A T G C A G T C A C T G A G T C A G C T A C T G
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.795
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 20.5bp
Average Position of motif in Background49.2 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGMGGACAGGCACGC-
--AGCAACAGCCGCACC
 A G T C C T G A A C T G G T A C C T A G T A C G T G C A T A G C C G T A A C T G A T C G A T G C C T G A A G T C C A T G A G T C A C G T
A C G T A C G T T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:CAGMGGACAGGCACGC-
-----------CACGCA
 A G T C C T G A A C T G G T A C C T A G T A C G T G C A T A G C C G T A A C T G A T C G A T G C C T G A A G T C C A T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAGMGGACAGGCACGC---
----ATAAAGGCGCGCGAT
 A G T C C T G A A C T G G T A C C T A G T A C G T G C A T A G C C G T A A C T G A T C G A T G C C T G A A G T C C A T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.53
Offset:9
Orientation:forward strand
Alignment:CAGMGGACAGGCACGC---
---------GGCACGCGTC
 A G T C C T G A A C T G G T A C C T A G T A C G T G C A T A G C C G T A A C T G A T C G A T G C C T G A A G T C C A T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CAGMGGACAGGCACGC--
--------TBGCACGCAA
 A G T C C T G A A C T G G T A C C T A G T A C G T G C A T A G C C G T A A C T G A T C G A T G C C T G A A G T C C A T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CAGMGGACAGGCACGC-----
------NNGGCCACGCCTTTN
 A G T C C T G A A C T G G T A C C T A G T A C G T G C A T A G C C G T A A C T G A T C G A T G C C T G A A G T C C A T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGMGGACAGGCACGC---
----ATAAGGGCGCGCGAT
 A G T C C T G A A C T G G T A C C T A G T A C G T G C A T A G C C G T A A C T G A T C G A T G C C T G A A G T C C A T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CAGMGGACAGGCACGC------
------CGAAGCACACAAAATA
 A G T C C T G A A C T G G T A C C T A G T A C G T G C A T A G C C G T A A C T G A T C G A T G C C T G A A G T C C A T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CAGMGGACAGGCACGC---
--------AGCCACTCAAG
 A G T C C T G A A C T G G T A C C T A G T A C G T G C A T A G C C G T A A C T G A T C G A T G C C T G A A G T C C A T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CAGMGGACAGGCACGC------
------AGCGGCACACACGCAA
 A G T C C T G A A C T G G T A C C T A G T A C G T G C A T A G C C G T A A C T G A T C G A T G C C T G A A G T C C A T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A