Information for 6-CTGGGCAGTA (Motif 13)

G A T C C G A T C A T G A C T G T A C G G A T C T G C A A T C G G A C T T G C A
Reverse Opposite:
A C G T C T G A T A G C A C G T C T A G A T G C T G A C G T A C G C T A C T A G
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.529
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif92.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets52.0 +/- 28.3bp
Average Position of motif in Background51.4 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCAGTA
WDNCTGGGCA---
 A C G T A C G T A C G T G A T C C G A T C A T G A C T G T A C G G A T C T G C A A T C G G A C T T G C A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGGGCAGTA
GCTGTG-----
 A C G T G A T C C G A T C A T G A C T G T A C G G A T C T G C A A T C G G A C T T G C A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGGGCAGTA-
CGTGGGTGGTCC
 A C G T G A T C C G A T C A T G A C T G T A C G G A T C T G C A A T C G G A C T T G C A A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGCAGTA
TNNGGGCAG--
 A C G T G A T C C G A T C A T G A C T G T A C G G A T C T G C A A T C G G A C T T G C A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGGGCAGTA-
AAGGCAAGTGT
 G A T C C G A T C A T G A C T G T A C G G A T C T G C A A T C G G A C T T G C A A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTGGGCAGTA--
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T G A T C C G A T C A T G A C T G T A C G G A T C T G C A A T C G G A C T T G C A A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGGGCAGTA------
GCTGGGGGGTACCCCTT
 A C G T G A T C C G A T C A T G A C T G T A C G G A T C T G C A A T C G G A C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGCAGTA
NGTGGGCAT--
 A C G T G A T C C G A T C A T G A C T G T A C G G A T C T G C A A T C G G A C T T G C A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------CTGGGCAGTA
RGSMTBCTGGGAAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G A T C A T G A C T G T A C G G A T C T G C A A T C G G A C T T G C A
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTGGGCAGTA--
CAGTGTGGTCGC
 G A T C C G A T C A T G A C T G T A C G G A T C T G C A A T C G G A C T T G C A A C G T A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C