Information for 3-TSKWHCTTAKCCA (Motif 8)

A C G T T A C G A C G T G C A T G A C T G A T C G A C T G C A T C G T A C A T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G G T A C G A C T C G T A C T G A C T A G C T G A C G T A T G C A A T G C C G T A
p-value:1e-10
log p-value:-2.366e+01
Information Content per bp:1.675
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif5.20%
Number of Background Sequences with motif163.0
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets61.1 +/- 20.3bp
Average Position of motif in Background50.1 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:TSKWHCTTAKCCA-
--------TGCCAA
 A C G T T A C G A C G T G C A T G A C T G A T C G A C T G C A T C G T A C A T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TSKWHCTTAKCCA-
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T T A C G A C G T G C A T G A C T G A T C G A C T G C A T C G T A C A T G A G T C A G T C C G T A A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TSKWHCTTAKCCA----
-----ACTAGCCAATCA
 A C G T T A C G A C G T G C A T G A C T G A T C G A C T G C A T C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TSKWHCTTAKCCA-
TGGCACCATGCCAA
 A C G T T A C G A C G T G C A T G A C T G A T C G A C T G C A T C G T A C A T G A G T C A G T C C G T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TSKWHCTTAKCCA
------TTTTCCA
 A C G T T A C G A C G T G C A T G A C T G A T C G A C T G C A T C G T A C A T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TSKWHCTTAKCCA--
------CGTGCCAAG
 A C G T T A C G A C G T G C A T G A C T G A T C G A C T G C A T C G T A C A T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TSKWHCTTAKCCA-
TGGCAGNCTGCCAG
 A C G T T A C G A C G T G C A T G A C T G A T C G A C T G C A T C G T A C A T G A G T C A G T C C G T A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.58
Offset:8
Orientation:forward strand
Alignment:TSKWHCTTAKCCA-
--------ATCCAC
 A C G T T A C G A C G T G C A T G A C T G A T C G A C T G C A T C G T A C A T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TSKWHCTTAKCCA--
-----ATTTTCCATT
 A C G T T A C G A C G T G C A T G A C T G A T C G A C T G C A T C G T A C A T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TSKWHCTTAKCCA
---TKCTGTTCCA
 A C G T T A C G A C G T G C A T G A C T G A T C G A C T G C A T C G T A C A T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A