Information for 7-ATGGCGCTGT (Motif 25)

C G T A C G A T A C T G A C T G A G T C A T C G A G T C C G A T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A C T A G A T G C A C T G A G T C A G T C C G T A A C G T
p-value:1e-5
log p-value:-1.247e+01
Information Content per bp:1.853
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets31.8 +/- 22.0bp
Average Position of motif in Background54.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCGCTGT
TAATGGCGGNC-
 A C G T A C G T C G T A C G A T A C T G A C T G A G T C A T C G A G T C C G A T A C T G A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATGGCGCTGT
--GGCGCGCT
 C G T A C G A T A C T G A C T G A G T C A T C G A G T C C G A T A C T G A C G T
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGGCGCTGT-------
AAGACGCTGTAAAGCGA
 C G T A C G A T A C T G A C T G A G T C A T C G A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGGCGCTGT-------
AAGACGCTGTAAAGCGA
 C G T A C G A T A C T G A C T G A G T C A T C G A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATGGCGCTGT---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T C G T A C G A T A C T G A C T G A G T C A T C G A G T C C G A T A C T G A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATGGCGCTGT---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T C G T A C G A T A C T G A C T G A G T C A T C G A G T C C G A T A C T G A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGGCGCTGT-------
AGGACGCTGTAAAGGGA
 C G T A C G A T A C T G A C T G A G T C A T C G A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCGCTGT
BNTGDCCTTG-
 A C G T C G T A C G A T A C T G A C T G A G T C A T C G A G T C C G A T A C T G A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ATGGCGCTGT-
-----GCTGTG
 C G T A C G A T A C T G A C T G A G T C A T C G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATGGCGCTGT
CAAGATGGCGGC--
 A C G T A C G T A C G T A C G T C G T A C G A T A C T G A C T G A G T C A T C G A G T C C G A T A C T G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T