Information for 7-ACTGTCCTAAAAG (Motif 15)

C G T A G T A C C G A T A T C G A C G T T G A C A G T C A G C T C G T A C T G A T C G A C G T A A T C G
Reverse Opposite:
T A G C G A C T A G C T A G C T C G A T C T G A T C A G A C T G G T C A T A G C C G T A A C T G G A C T
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.702
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif34.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets45.8 +/- 29.4bp
Average Position of motif in Background49.1 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACTGTCCTAAAAG--
TAAAGTCGTAAAATAG
 A C G T C G T A G T A C C G A T A T C G A C G T T G A C A G T C A G C T C G T A C T G A T C G A C G T A A T C G A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0047.1_Hoxa11/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACTGTCCTAAAAG--
TAAAGTCGTAAAACAT
 A C G T C G T A G T A C C G A T A T C G A C G T T G A C A G T C A G C T C G T A C T G A T C G A C G T A A T C G A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACTGTCCTAAAAG--
TAAAGTCGTAAAACGT
 A C G T C G T A G T A C C G A T A T C G A C G T T G A C A G T C A G C T C G T A C T G A T C G A C G T A A T C G A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ACTGTCCTAAAAG
---GTCGTAAAAT
 C G T A G T A C C G A T A T C G A C G T T G A C A G T C A G C T C G T A C T G A T C G A C G T A A T C G
A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

HOXD11/MA0908.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ACTGTCCTAAAAG
---GTCGTAAAAA
 C G T A G T A C C G A T A T C G A C G T T G A C A G T C A G C T C G T A C T G A T C G A C G T A A T C G
A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACTGTCCTAAAAG---
TAAGGTCGTAAAATCCT
 A C G T C G T A G T A C C G A T A T C G A C G T T G A C A G T C A G C T C G T A C T G A T C G A C G T A A T C G A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACTGTCCTAAAAG---
CAAGGTCGTAAAATCTT
 A C G T C G T A G T A C C G A T A T C G A C G T T G A C A G T C A G C T C G T A C T G A T C G A C G T A A T C G A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

HOXC11/MA0651.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACTGTCCTAAAAG
--GGTCGTAAAAT
 C G T A G T A C C G A T A T C G A C G T T G A C A G T C A G C T C G T A C T G A T C G A C G T A A T C G
A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTGTCCTAAAAG
--GGTCGTAAAAA
 C G T A G T A C C G A T A T C G A C G T T G A C A G T C A G C T C G T A C T G A T C G A C G T A A T C G
A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTGTCCTAAAAG-
--GGTCGTAAAATT
 C G T A G T A C C G A T A T C G A C G T T G A C A G T C A G C T C G T A C T G A T C G A C G T A A T C G A C G T
A C G T A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T