Information for 1-TTCTTWGCTMAGGNAM (Motif 1)

A C G T C G A T A G T C G A C T C G A T C G A T A T C G A G T C A G C T T G C A C G T A A T C G A C T G G C A T C G T A G T A C
Reverse Opposite:
C A T G A C G T C G T A A G T C A T G C G A C T A C G T C T G A A C T G A T G C G C A T C G T A C G T A A C T G C G T A C G T A
p-value:1e-13
log p-value:-3.210e+01
Information Content per bp:1.724
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.8 +/- 14.4bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCTTWGCTMAGGNAM
NNCGTTGCTATGGNN-
 A C G T C G A T A G T C G A C T C G A T C G A T A T C G A G T C A G C T T G C A C G T A A T C G A C T G G C A T C G T A G T A C
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TTCTTWGCTMAGGNAM--
----TTGCCATGGCAACC
 A C G T C G A T A G T C G A C T C G A T C G A T A T C G A G T C A G C T T G C A C G T A A T C G A C T G G C A T C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTCTTWGCTMAGGNAM--
----TTGCCATGGCAACN
 A C G T C G A T A G T C G A C T C G A T C G A T A T C G A G T C A G C T T G C A C G T A A T C G A C T G G C A T C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTCTTWGCTMAGGNAM---
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C G A C T C G A T C G A T A T C G A G T C A G C T T G C A C G T A A T C G A C T G G C A T C G T A G T A C A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

RFX5/MA0510.2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTCTTWGCTMAGGNAM--
--CGTTGCCATGGCAACG
 A C G T C G A T A G T C G A C T C G A T C G A T A T C G A G T C A G C T T G C A C G T A A T C G A C T G G C A T C G T A G T A C A C G T A C G T
A C G T A C G T A T G C C T A G A G C T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T G C A G A T C T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TTCTTWGCTMAGGNAM-
---GTTGCCATGGNAAC
 A C G T C G A T A G T C G A C T C G A T C G A T A T C G A G T C A G C T T G C A C G T A A T C G A C T G G C A T C G T A G T A C A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTCTTWGCTMAGGNAM
NCCGTTGCTANGNGN-
 A C G T C G A T A G T C G A C T C G A T C G A T A T C G A G T C A G C T T G C A C G T A A T C G A C T G G C A T C G T A G T A C
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T

RFX2/MA0600.2/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TTCTTWGCTMAGGNAM--
--CGTTGCCATGGCAACG
 A C G T C G A T A G T C G A C T C G A T C G A T A T C G A G T C A G C T T G C A C G T A A T C G A C T G G C A T C G T A G T A C A C G T A C G T
A C G T A C G T A T G C T C A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:TTCTTWGCTMAGGNAM
-----TTCTNMGGAA-
 A C G T C G A T A G T C G A C T C G A T C G A T A T C G A G T C A G C T T G C A C G T A A T C G A C T G G C A T C G T A G T A C
A C G T A C G T A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T

RFX3/MA0798.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TTCTTWGCTMAGGNAM--
--CGTTGCCATGGCAACN
 A C G T C G A T A G T C G A C T C G A T C G A T A T C G A G T C A G C T T G C A C G T A A T C G A C T G G C A T C G T A G T A C A C G T A C G T
A C G T A C G T A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G