Information for 1-CAGGCAGAGGGCTGAG (Motif 4)

A T G C C T G A A C T G A T C G A G T C C T G A A C T G C G T A A C T G A C T G A C T G A G T C A G C T C T A G T C G A C T A G
Reverse Opposite:
A G T C A G C T A G T C C T G A A C T G A G T C A G T C A G T C A C G T A G T C A G C T A C T G A T G C A G T C A G C T A T C G
p-value:1e-12
log p-value:-2.858e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.7 +/- 25.7bp
Average Position of motif in Background57.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGGCAGAGGGCTGAG
CCGCCCAAGGGCAG--
 A T G C C T G A A C T G A T C G A G T C C T G A A C T G C G T A A C T G A C T G A C T G A G T C A G C T C T A G T C G A C T A G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGGCAGAGGGCTGAG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A T G C C T G A A C T G A T C G A G T C C T G A A C T G C G T A A C T G A C T G A C T G A G T C A G C T C T A G T C G A C T A G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGGCAGAGGGCTGAG
AAGGCCAGATGGTCCGG
 A C G T A T G C C T G A A C T G A T C G A G T C C T G A A C T G C G T A A C T G A C T G A C T G A G T C A G C T C T A G T C G A C T A G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAGGCAGAGGGCTGAG
--AACAGATGGC----
 A T G C C T G A A C T G A T C G A G T C C T G A A C T G C G T A A C T G A C T G A C T G A G T C A G C T C T A G T C G A C T A G
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCAGAGGGCTGAG---
YCAGGCWCAGTACCAGGCTC
 A C G T A T G C C T G A A C T G A T C G A G T C C T G A A C T G C G T A A C T G A C T G A C T G A G T C A G C T C T A G T C G A C T A G A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGGCAGAGGGCTGAG
TAGGGCAAAGGTCA---
 A C G T A T G C C T G A A C T G A T C G A G T C C T G A A C T G C G T A A C T G A C T G A C T G A G T C A G C T C T A G T C G A C T A G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGGCAGAGGGCTGAG
GTAGGGCAAAGGTCA---
 A C G T A C G T A T G C C T G A A C T G A T C G A G T C C T G A A C T G C G T A A C T G A C T G A C T G A G T C A G C T C T A G T C G A C T A G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCAGAGGGCTGAG
TGGGGCAAAGGTCA---
 A C G T A T G C C T G A A C T G A T C G A G T C C T G A A C T G C G T A A C T G A C T G A C T G A G T C A G C T C T A G T C G A C T A G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGGCAGAGGGCTGAG
-TGCCCNGGGGCA---
 A T G C C T G A A C T G A T C G A G T C C T G A A C T G C G T A A C T G A C T G A C T G A G T C A G C T C T A G T C G A C T A G
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGGCAGAGGGCTGAG
GGGGCCGAGGCCTG--
 A T G C C T G A A C T G A T C G A G T C C T G A A C T G C G T A A C T G A C T G A C T G A G T C A G C T C T A G T C G A C T A G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T