Information for 13-GCGGACGCAG (Motif 23)

C T A G A G T C C T A G A C T G C G T A A G T C A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G T C A C T G A G T C
p-value:1e-5
log p-value:-1.231e+01
Information Content per bp:1.946
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.0 +/- 20.1bp
Average Position of motif in Background46.4 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GCGGACGCAG
NCGCGGACGTTG
 A C G T A C G T C T A G A G T C C T A G A C T G C G T A A G T C A C T G A G T C C G T A A C T G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCGGACGCAG--
GCTGASTCAGCA
 C T A G A G T C C T A G A C T G C G T A A G T C A C T G A G T C C G T A A C T G A C G T A C G T
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCGGACGCAG---
AAGGKGRCGCAGGCA
 A C G T A C G T C T A G A G T C C T A G A C T G C G T A A G T C A C T G A G T C C G T A A C T G A C G T A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGGACGCAG
TGCTGACTCA-
 A C G T C T A G A G T C C T A G A C T G C G T A A G T C A C T G A G T C C G T A A C T G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

ETV5/MA0765.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGGACGCAG
ACCGGAAGTG-
 A C G T C T A G A G T C C T A G A C T G C G T A A G T C A C T G A G T C C G T A A C T G
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T

EGR2/MA0472.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCGGACGCAG
ACGCCCACGCA-
 A C G T A C G T C T A G A G T C C T A G A C T G C G T A A G T C A C T G A G T C C G T A A C T G
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCGGACGCAG----
RAAWNTGCTGASTCAGCANW
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C T A G A C T G C G T A A G T C A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

MAFG/MA0659.1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCGGACGCAG------
AATNTGCTGACTCAGCANTTT
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C T A G A C T G C G T A A G T C A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C G T A G A C T T A C G G T A C G A C T C A T G G T C A T A G C C G A T G T A C C T G A C A T G A T G C C T G A G C T A C G A T G C A T G C A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCGGACGCAG
---CACGCA-
 C T A G A G T C C T A G A C T G C G T A A G T C A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCGGACGCAG
CCAGACRSVB
 C T A G A G T C C T A G A C T G C G T A A G T C A C T G A G T C C G T A A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C