Information for 1-GAGGGGAAGA (Motif 2)

C T A G T C G A T C A G A C T G C T A G C T A G C T G A C G T A C A T G C T G A
Reverse Opposite:
G A C T G T A C G C A T G A C T G A T C G A T C T G A C A G T C A G C T G A T C
p-value:1e-12
log p-value:-2.891e+01
Information Content per bp:1.645
Number of Target Sequences with motif112.0
Percentage of Target Sequences with motif13.68%
Number of Background Sequences with motif2089.8
Percentage of Background Sequences with motif6.56%
Average Position of motif in Targets54.1 +/- 26.3bp
Average Position of motif in Background49.8 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGAAGA
GGAGGGGGAA-
 A C G T C T A G T C G A T C A G A C T G C T A G C T A G C T G A C G T A C A T G C T G A
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAGGGGAAGA
-AGAGGAA--
 C T A G T C G A T C A G A C T G C T A G C T A G C T G A C G T A C A T G C T G A
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGGAAGA---
NNNNGGGGGAAGANGG
 A C G T A C G T A C G T C T A G T C G A T C A G A C T G C T A G C T A G C T G A C G T A C A T G C T G A A C G T A C G T A C G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAGGGGAAGA---
-TGGGGAAGGGCM
 C T A G T C G A T C A G A C T G C T A G C T A G C T G A C G T A C A T G C T G A A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAGGGGAAGA
-TGGGGA---
 C T A G T C G A T C A G A C T G C T A G C T A G C T G A C G T A C A T G C T G A
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGGGGAAGA--
TTAAGAGGAAGTTA
 A C G T A C G T C T A G T C G A T C A G A C T G C T A G C T A G C T G A C G T A C A T G C T G A A C G T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAGGGGAAGA
-ACCGGAAG-
 C T A G T C G A T C A G A C T G C T A G C T A G C T G A C G T A C A T G C T G A
A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGGGGAAGA-
-AGAGGAAGTG
 C T A G T C G A T C A G A C T G C T A G C T A G C T G A C G T A C A T G C T G A A C G T
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GAGGGGAAGA
----NGAAGC
 C T A G T C G A T C A G A C T G C T A G C T A G C T G A C G T A C A T G C T G A
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

ETV6/MA0645.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAGGGGAAGA-
-AGCGGAAGTG
 C T A G T C G A T C A G A C T G C T A G C T A G C T G A C G T A C A T G C T G A A C G T
A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G