Information for 9-AAATRGAATGCAGCWG (Motif 9)

C G T A C T G A G T C A G C A T C T A G C A T G C G T A G T C A C G A T C T A G G T A C C G T A T A C G T A G C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G A T G C A C G T A C T G G A T C C G T A A C G T C G A T G T A C A G T C C G T A C A G T G A C T G C A T
p-value:1e-8
log p-value:-1.878e+01
Information Content per bp:1.667
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif23.81%
Number of Background Sequences with motif147.3
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets49.4 +/- 21.1bp
Average Position of motif in Background51.0 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.63
Offset:9
Orientation:reverse strand
Alignment:AAATRGAATGCAGCWG---
---------GCAGCTGTNN
 C G T A C T G A G T C A G C A T C T A G C A T G C G T A G T C A C G A T C T A G G T A C C G T A T A C G T A G C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAATRGAATGCAGCWG-
YTAATTRAWWCCAGATGT
 A C G T C G T A C T G A G T C A G C A T C T A G C A T G C G T A G T C A C G A T C T A G G T A C C G T A T A C G T A G C C G T A A C T G A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.62
Offset:10
Orientation:reverse strand
Alignment:AAATRGAATGCAGCWG--
----------CAGCTGNT
 C G T A C T G A G T C A G C A T C T A G C A T G C G T A G T C A C G A T C T A G G T A C C G T A T A C G T A G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.62
Offset:9
Orientation:forward strand
Alignment:AAATRGAATGCAGCWG---
---------NCAGCTGCTG
 C G T A C T G A G T C A G C A T C T A G C A T G C G T A G T C A C G A T C T A G G T A C C G T A T A C G T A G C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.61
Offset:9
Orientation:forward strand
Alignment:AAATRGAATGCAGCWG---
---------ACAGCTGTTN
 C G T A C T G A G T C A G C A T C T A G C A T G C G T A G T C A C G A T C T A G G T A C C G T A T A C G T A G C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.61
Offset:9
Orientation:forward strand
Alignment:AAATRGAATGCAGCWG---
---------VCAGCTGBNN
 C G T A C T G A G T C A G C A T C T A G C A T G C G T A G T C A C G A T C T A G G T A C C G T A T A C G T A G C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:AAATRGAATGCAGCWG----
--------NVCAGCTGBBNN
 C G T A C T G A G T C A G C A T C T A G C A T G C G T A G T C A C G A T C T A G G T A C C G T A T A C G T A G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.59
Offset:8
Orientation:forward strand
Alignment:AAATRGAATGCAGCWG-----
--------TGCAGCTGTCCCT
 C G T A C T G A G T C A G C A T C T A G C A T G C G T A G T C A C G A T C T A G G T A C C G T A T A C G T A G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.59
Offset:8
Orientation:forward strand
Alignment:AAATRGAATGCAGCWG----
--------AGCAGCTGCTNN
 C G T A C T G A G T C A G C A T C T A G C A T G C G T A G T C A C G A T C T A G G T A C C G T A T A C G T A G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:AAATRGAATGCAGCWG--
--------AGCAGCTGCT
 C G T A C T G A G T C A G C A T C T A G C A T G C G T A G T C A C G A T C T A G G T A C C G T A T A C G T A G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T