Information for 6-YCMYRYTMRRSCMKCT (Motif 6)

A G T C A G T C G T A C A G T C C T G A A G T C A C G T G T C A C T A G C T A G A T C G A G T C G T C A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G G T C A A C G T A C T G A T G C A G T C G A C T A C G T C G T A C T A G A G C T C T A G A C T G A C T G C T A G
p-value:1e-8
log p-value:-2.015e+01
Information Content per bp:1.748
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.7 +/- 9.7bp
Average Position of motif in Background56.4 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.54
Offset:9
Orientation:forward strand
Alignment:YCMYRYTMRRSCMKCT---
---------GCCATCTGTT
 A G T C A G T C G T A C A G T C C T G A A G T C A C G T G T C A C T A G C T A G A T C G A G T C G T C A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:2
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:YCMYRYTMRRSCMKCT-----
---------GCCAGCTGBTNB
 A G T C A G T C G T A C A G T C C T G A A G T C A C G T G T C A C T A G C T A G A T C G A G T C G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.54
Offset:9
Orientation:forward strand
Alignment:YCMYRYTMRRSCMKCT-
---------ANCAGCTG
 A G T C A G T C G T A C A G T C C T G A A G T C A C G T G T C A C T A G C T A G A T C G A G T C G T C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:YCMYRYTMRRSCMKCT-----
---------NVCAGCTGBBNN
 A G T C A G T C G T A C A G T C C T G A A G T C A C G T G T C A C T A G C T A G A T C G A G T C G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.53
Offset:9
Orientation:forward strand
Alignment:YCMYRYTMRRSCMKCT---
---------ACCATCTGTT
 A G T C A G T C G T A C A G T C C T G A A G T C A C G T G T C A C T A G C T A G A T C G A G T C G T C A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:YCMYRYTMRRSCMKCT
-CCCCCTTGGGCCCC-
 A G T C A G T C G T A C A G T C C T G A A G T C A C G T G T C A C T A G C T A G A T C G A G T C G T C A A C G T A G T C A C G T
A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:YCMYRYTMRRSCMKCT------
-----CCNNACCATCTGGCCTN
 A G T C A G T C G T A C A G T C C T G A A G T C A C G T G T C A C T A G C T A G A T C G A G T C G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:YCMYRYTMRRSCMKCT-
--WCATTTTGKCCTCYT
 A G T C A G T C G T A C A G T C C T G A A G T C A C G T G T C A C T A G C T A G A T C G A G T C G T C A A C G T A G T C A C G T A C G T
A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.51
Offset:9
Orientation:forward strand
Alignment:YCMYRYTMRRSCMKCT---
---------AGCAGCTGCT
 A G T C A G T C G T A C A G T C C T G A A G T C A C G T G T C A C T A G C T A G A T C G A G T C G T C A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:YCMYRYTMRRSCMKCT--
--------CAGCAGCTGN
 A G T C A G T C G T A C A G T C C T G A A G T C A C G T G T C A C T A G C T A G A T C G A G T C G T C A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T