Information for 23-ATCCAGACGC (Motif 48)

C G T A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G C G T A A C G T
p-value:1e-3
log p-value:-6.985e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background47.2 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:ATCCAGACGC--
--CCAGACRSVB
 C G T A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---ATCCAGACGC----
CAAATCCAGACATCACA
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:ATCCAGACGC
--CCAGACAG
 C G T A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATCCAGACGC
ATGCCAGACN-
 A C G T C G T A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATCCAGACGC--
CATCCAGATGTTC
 A C G T C G T A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C G T
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATCCAGACGC-
-TCCAGATGTT
 C G T A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C A C G T
A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATCCAGACGC--
AANNATCCGGATGTNN
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATCCAGACGC
TGTCTAGACG-
 A C G T C G T A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATCCAGACGC---
AGCAACAGCCGCACC
 A C G T A C G T C G T A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATCCAGACGC
--BCAGACWA
 C G T A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A