Information for 25-ATCCCTCATGGTCTCA (Motif 45)

C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T
p-value:1e-3
log p-value:-7.678e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets92.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATCCCTCATGGTCTCA
GYCATCMATCAT-------
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C C G T A
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:ATCCCTCATGGTCTCA--
--------TGGTTTCAGT
 C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:ATCCCTCATGGTCTCA-----
----TNNNNGGTGTCATNTNT
 C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:forward strand
Alignment:ATCCCTCATGGTCTCA
-----TCAAGGTCATA
 C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:ATCCCTCATGGTCTCA
----NTCAAGGTCA--
 C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ATCCCTCATGGTCTCA
CATGACTCATC------
 A C G T C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C C G T A
T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ATCCCTCATGGTCTCA
ATGACTCAT-------
 C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C C G T A
T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:ATCCCTCATGGTCTCA
----CTCATTGTC---
 C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:ATCCCTCATGGTCTCA
----BTCAAGGTCA--
 C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:ATCCCTCATGGTCTCA------------
---CCTCATGGTGYCYTWYTCCCTTGTG
 C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A T C A G C T T G A C G C T A A G C T C A T G A C T G A C G T T C A G A G T C G A T C G A C T A G C T G C T A A G T C A G C T A G T C G A T C A T G C A G C T G A C T C A T G A C G T A T C G