Information for 4-YGCAGBBCACRWCTCT (Motif 4)

A G C T A C T G G T A C C G T A A T C G A C G T A G C T T A G C C G T A A G T C T C G A G C T A T A G C C G A T G A T C A G C T
Reverse Opposite:
C T G A C A T G C G T A A T C G C G A T A G C T T C A G G A C T A C T G T C G A T G C A T A G C A C G T C A T G T G A C C T G A
p-value:1e-9
log p-value:-2.200e+01
Information Content per bp:1.552
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif375.6
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets52.4 +/- 27.6bp
Average Position of motif in Background48.5 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:YGCAGBBCACRWCTCT-
--NNGGCCACGCCTTTN
 A G C T A C T G G T A C C G T A A T C G A C G T A G C T T A G C C G T A A G T C T C G A G C T A T A G C C G A T G A T C A G C T A C G T
A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YGCAGBBCACRWCTCT
--AAGGTCAC------
 A G C T A C T G G T A C C G T A A T C G A C G T A G C T T A G C C G T A A G T C T C G A G C T A T A G C C G A T G A T C A G C T
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:YGCAGBBCACRWCTCT
------TCACACCT--
 A G C T A C T G G T A C C G T A A T C G A C G T A G C T T A G C C G T A A G T C T C G A G C T A T A G C C G A T G A T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:YGCAGBBCACRWCTCT
------TCACACCT--
 A G C T A C T G G T A C C G T A A T C G A C G T A G C T T A G C C G T A A G T C T C G A G C T A T A G C C G A T G A T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:YGCAGBBCACRWCTCT
-----TTCACACCTT-
 A G C T A C T G G T A C C G T A A T C G A C G T A G C T T A G C C G T A A G T C T C G A G C T A T A G C C G A T G A T C A G C T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:YGCAGBBCACRWCTCT
----CTTCACACCTA-
 A G C T A C T G G T A C C G T A A T C G A C G T A G C T T A G C C G T A A G T C T C G A G C T A T A G C C G A T G A T C A G C T
A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:YGCAGBBCACRWCTCT
------TCACACCT--
 A G C T A C T G G T A C C G T A A T C G A C G T A G C T T A G C C G T A A G T C T C G A G C T A T A G C C G A T G A T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:YGCAGBBCACRWCTCT--
---ATGTCACAACAACAC
 A G C T A C T G G T A C C G T A A T C G A C G T A G C T T A G C C G T A A G T C T C G A G C T A T A G C C G A T G A T C A G C T A C G T A C G T
A C G T A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:YGCAGBBCACRWCTCT
--NTTTTCACACCTT-
 A G C T A C T G G T A C C G T A A T C G A C G T A G C T T A G C C G T A A G T C T C G A G C T A T A G C C G A T G A T C A G C T
A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:YGCAGBBCACRWCTCT
---CNGTCACGCCAC-
 A G C T A C T G G T A C C G T A A T C G A C G T A G C T T A G C C G T A A G T C T C G A G C T A T A G C C G A T G A T C A G C T
A C G T A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T