Information for 11-CACAGTCTCG (Motif 35)

A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C G T A C T G
p-value:1e-3
log p-value:-7.678e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 0.0bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CACAGTCTCG-----
AGTATTCTCGGTTGC
 A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACAGTCTCG-----
NNAATTCTCGNTNAN
 A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CACAGTCTCG-----
ACCACTCTCGGTCAC
 A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CACAGTCTCG
--CTGTCTGG
 A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACAGTCTCG
CACAGN----
 A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACAGTCTCG--
AGCAACAGCCGCACC
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0035.1_Irf5_1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACAGTCTCG------
-NTGGTTTCGGTTNNN
 A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CACAGTCTCG-----
NNNTTGGTTTCGNTNNN
 A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACAGTCTCG-----
TNTGGTTTCGATACN
 A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

POL002.1_INR/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACAGTCTCG
-TCAGTCTT-
 A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T