Information for 9-ACTATGGCAT (Motif 34)

C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T
p-value:1e-3
log p-value:-7.678e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 0.0bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF410/MA0752.1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACTATGGCAT---
GANTATTATGGGATGGA
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACTATGGCAT------
TATTATGGGATGGATAA
 A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACTATGGCAT
VRAACAATGG---
 A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACTATGGCAT
GAACAATGG---
 A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACTATGGCAT
AACAAAGG---
 A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACTATGGCAT-
--NTTGGCANN
 C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACTATGGCAT
GAACAATGGN--
 A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C G T
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACTATGGCAT
-GGTTGGCAT
 C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C G T
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACTATGGCAT
RAACAATGGN--
 A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C G T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACTATGGCAT
---TTGGCA-
 C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T