Information for 16-CCMRCAGCTGCTGCAG (Motif 31)

A T G C A G T C G T C A T C A G G T A C G C T A A C T G A T G C C G A T A T C G A T G C C G A T C A T G A T G C C G T A A T C G
Reverse Opposite:
A T G C C G A T A T C G G T A C C G T A A T C G A T G C C G T A A T C G T G A C C G A T A C T G A G T C C A G T C T A G A T C G
p-value:1e-4
log p-value:-1.125e+01
Information Content per bp:1.650
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif98.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets53.8 +/- 20.8bp
Average Position of motif in Background49.1 +/- 38.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCMRCAGCTGCTGCAG
CTCAGCAGCTGCTACTG
 A C G T A T G C A G T C G T C A T C A G G T A C G C T A A C T G A T G C C G A T A T C G A T G C C G A T C A T G A T G C C G T A A T C G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCMRCAGCTGCTGCAG
--AGCAGCTGCTNN--
 A T G C A G T C G T C A T C A G G T A C G C T A A C T G A T G C C G A T A T C G A T G C C G A T C A T G A T G C C G T A A T C G
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CCMRCAGCTGCTGCAG
---NCAGCTGCTG---
 A T G C A G T C G T C A T C A G G T A C G C T A A C T G A T G C C G A T A T C G A T G C C G A T C A T G A T G C C G T A A T C G
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCMRCAGCTGCTGCAG
--AGCAGCTGCT----
 A T G C A G T C G T C A T C A G G T A C G C T A A C T G A T G C C G A T A T C G A T G C C G A T C A T G A T G C C G T A A T C G
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CCMRCAGCTGCTGCAG
----CAGCTGNT----
 A T G C A G T C G T C A T C A G G T A C G C T A A C T G A T G C C G A T A T C G A T G C C G A T C A T G A T G C C G T A A T C G
A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCMRCAGCTGCTGCAG
--CGCAGCTGCG----
 A T G C A G T C G T C A T C A G G T A C G C T A A C T G A T G C C G A T A T C G A T G C C G A T C A T G A T G C C G T A A T C G
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCMRCAGCTGCTGCAG
--AACAGCTGCAG---
 A T G C A G T C G T C A T C A G G T A C G C T A A C T G A T G C C G A T A T C G A T G C C G A T C A T G A T G C C G T A A T C G
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCMRCAGCTGCTGCAG
--GACAGCTGCAG---
 A T G C A G T C G T C A T C A G G T A C G C T A A C T G A T G C C G A T A T C G A T G C C G A T C A T G A T G C C G T A A T C G
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCMRCAGCTGCTGCAG
NNVVCAGCTGBN----
 A T G C A G T C G T C A T C A G G T A C G C T A A C T G A T G C C G A T A T C G A T G C C G A T C A T G A T G C C G T A A T C G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCMRCAGCTGCTGCAG
NGNGACAGCTGCN----
 A C G T A T G C A G T C G T C A T C A G G T A C G C T A A C T G A T G C C G A T A T C G A T G C C G A T C A T G A T G C C G T A A T C G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T