Information for 10-GGGTAABGCCCTA (Motif 18)

A C T G A C T G C T A G C G A T C T G A C G T A A C G T C T A G A G T C A G T C A G T C A G C T C G T A
Reverse Opposite:
A C G T C T G A A C T G C T A G A C T G A G T C T G A C A C G T A G C T C G T A A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.471e+01
Information Content per bp:1.803
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif9.52%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.5 +/- 11.5bp
Average Position of motif in Background30.3 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGTAABGCCCTA
GGGAAATCCCCN-
 A C T G A C T G C T A G C G A T C T G A C G T A A C G T C T A G A G T C A G T C A G T C A G C T C G T A
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGTAABGCCCTA
AGGGGAATCCCCT-
 A C G T A C T G A C T G C T A G C G A T C T G A C G T A A C G T C T A G A G T C A G T C A G T C A G C T C G T A
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGTAABGCCCTA
-GGAAATCCCC--
 A C T G A C T G C T A G C G A T C T G A C G T A A C G T C T A G A G T C A G T C A G T C A G C T C G T A
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGTAABGCCCTA
GGGGGAATCCCC--
 A C G T A C T G A C T G C T A G C G A T C T G A C G T A A C G T C T A G A G T C A G T C A G T C A G C T C G T A
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGTAABGCCCTA
-GGAAATTCCC--
 A C T G A C T G C T A G C G A T C T G A C G T A A C G T C T A G A G T C A G T C A G T C A G C T C G T A
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGGTAABGCCCTA
AGGGGATTCCCCT-
 A C G T A C T G A C T G C T A G C G A T C T G A C G T A A C G T C T A G A G T C A G T C A G T C A G C T C G T A
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGTAABGCCCTA
-GGAAATTCCC--
 A C T G A C T G C T A G C G A T C T G A C G T A A C G T C T A G A G T C A G T C A G T C A G C T C G T A
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGTAABGCCCTA
-GGAAANCCCC--
 A C T G A C T G C T A G C G A T C T G A C G T A A C G T C T A G A G T C A G T C A G T C A G C T C G T A
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGGTAABGCCCTA--
AGGCTAATCCCCAANG
 A C G T A C T G A C T G C T A G C G A T C T G A C G T A A C G T C T A G A G T C A G T C A G T C A G C T C G T A A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGTAABGCCCTA---
AAGCATACGCCCAACTT
 A C G T A C T G A C T G C T A G C G A T C T G A C G T A A C G T C T A G A G T C A G T C A G T C A G C T C G T A A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T