Information for 7-YTGAARTKSWYSW (Motif 14)

A G C T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A T G C C G T A A G T C A T C G C G T A
Reverse Opposite:
C G A T A T G C C T A G C G A T A T C G G T C A C G T A A G T C A C G T A C G T A G T C C G T A C T G A
p-value:1e-6
log p-value:-1.599e+01
Information Content per bp:1.778
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets72.7 +/- 5.4bp
Average Position of motif in Background66.5 +/- 39.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:YTGAARTKSWYSW
NTCAAGTGG----
 A G C T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A T G C C G T A A G T C A T C G C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YTGAARTKSWYSW
NTCAAGTGGN---
 A G C T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A T G C C G T A A G T C A T C G C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---YTGAARTKSWYSW
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A G C T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A T G C C G T A A G T C A T C G C G T A
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----YTGAARTKSWYSW
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A T G C C G T A A G T C A T C G C G T A
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---YTGAARTKSWYSW
CCTTTGATGT------
 A C G T A C G T A C G T A G C T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A T G C C G T A A G T C A T C G C G T A
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---YTGAARTKSWYSW
CCTTTGAWGT------
 A C G T A C G T A C G T A G C T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A T G C C G T A A G T C A T C G C G T A
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---YTGAARTKSWYSW
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A G C T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A T G C C G T A A G T C A T C G C G T A
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YTGAARTKSWYSW
CTYRAGTGSY---
 A G C T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A T G C C G T A A G T C A T C G C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---YTGAARTKSWYSW-
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A G C T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A T G C C G T A A G T C A T C G C G T A A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---YTGAARTKSWYSW
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A G C T A C G T A C T G C G T A C G T A C T A G A C G T A C G T A T G C C G T A A G T C A T C G C G T A
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A