Information for 6-WTRGCAYCTCYCC (Motif 13)

C G A T A C G T C T A G A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C
Reverse Opposite:
C T A G A C T G C T A G A C T G C G T A A C T G C T A G C G A T A C T G A G T C A G T C C G T A C G T A
p-value:1e-6
log p-value:-1.610e+01
Information Content per bp:1.866
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif9.52%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 23.0bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:WTRGCAYCTCYCC
-TGACACCT----
 C G A T A C G T C T A G A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-WTRGCAYCTCYCC
ATTAACACCT----
 A C G T C G A T A C G T C T A G A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--WTRGCAYCTCYCC
NNTTGGCANN-----
 A C G T A C G T C G A T A C G T C T A G A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:WTRGCAYCTCYCC-
--GGCCCCGCCCCC
 C G A T A C G T C T A G A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WTRGCAYCTCYCC--
-TGGCACCATGCCAA
 C G A T A C G T C T A G A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:WTRGCAYCTCYCC-
--------TCCCCA
 C G A T A C G T C T A G A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:WTRGCAYCTCYCC-
---GCCCCGCCCCC
 C G A T A C G T C T A G A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:WTRGCAYCTCYCC
---GCCCCGCCCC
 C G A T A C G T C T A G A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--WTRGCAYCTCYCC
GGTTGGCAT------
 A C G T A C G T C G A T A C G T C T A G A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:WTRGCAYCTCYCC
-SNGCACCTGCHS
 C G A T A C G T C T A G A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A G T C
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C