Information for 7-CCGAGYGTRTYGC (Motif 8)

A G T C A G T C A T C G C G T A A C T G A G T C A C T G C G A T C T A G A C G T A G T C C T A G A T G C
Reverse Opposite:
A T C G A G T C C T A G C G T A A G T C C G T A A G T C T C A G A G T C A C G T A T G C C T A G A C T G
p-value:1e-11
log p-value:-2.738e+01
Information Content per bp:1.877
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 30.6bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGYGTRTYGC
NNNACCGAGAGTNNN--
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G C G T A A C T G A G T C A C T G C G A T C T A G A C G T A G T C C T A G A T G C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGYGTRTYGC
GNNACCGAGAATNNN--
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G C G T A A C T G A G T C A C T G C G A T C T A G A C G T A G T C C T A G A T G C
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCGAGYGTRTYGC-
--NTGGGTGTGGCC
 A G T C A G T C A T C G C G T A A C T G A G T C A C T G C G A T C T A G A C G T A G T C C T A G A T G C A C G T
A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCGAGYGTRTYGC
GAGSCCGAGC-------
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G C G T A A C T G A G T C A C T G C G A T C T A G A C G T A G T C C T A G A T G C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCGAGYGTRTYGC-
---TGGGTGTGGCN
 A G T C A G T C A T C G C G T A A C T G A G T C A C T G C G A T C T A G A C G T A G T C C T A G A T G C A C G T
A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCGAGYGTRTYGC-
NNGCGTGTGTGCNGCN
 A C G T A C G T A G T C A G T C A T C G C G T A A C T G A G T C A C T G C G A T C T A G A C G T A G T C C T A G A T G C A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCGAGYGTRTYGC
---TGGGTGTGGC
 A G T C A G T C A T C G C G T A A C T G A G T C A C T G C G A T C T A G A C G T A G T C C T A G A T G C
A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCGAGYGTRTYGC
TTGACCGAGAATTCC--
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G C G T A A C T G A G T C A C T G C G A T C T A G A C G T A G T C C T A G A T G C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCGAGYGTRTYGC
TTRAGTGSYK---
 A G T C A G T C A T C G C G T A A C T G A G T C A C T G C G A T C T A G A C G T A G T C C T A G A T G C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCGAGYGTRTYGC---
GCGGAGGTGTCGCCTC
 A G T C A G T C A T C G C G T A A C T G A G T C A C T G C G A T C T A G A C G T A G T C C T A G A T G C A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C