Information for 5-GGTGCCGCKGGCT (Motif 6)

A C T G A T C G G A C T A C T G A T G C A G T C A C T G A G T C C A G T A C T G A T C G A T G C A C G T
Reverse Opposite:
G T C A A T C G T A G C G T A C G T C A A C T G A G T C T C A G A T C G G T A C C G T A A T G C A G T C
p-value:1e-11
log p-value:-2.751e+01
Information Content per bp:1.783
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.1 +/- 22.0bp
Average Position of motif in Background51.2 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GGTGCCGCKGGCT
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G A T C G G A C T A C T G A T G C A G T C A C T G A G T C C A G T A C T G A T C G A T G C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTGCCGCKGGCT--
ANTGCCTGAGGCAAN
 A C T G A T C G G A C T A C T G A T G C A G T C A C T G A G T C C A G T A C T G A T C G A T G C A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTGCCGCKGGCT
--TGCCTGAGGCN
 A C T G A T C G G A C T A C T G A T G C A G T C A C T G A G T C C A G T A C T G A T C G A T G C A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTGCCGCKGGCT
--NGCCTNAGGCN
 A C T G A T C G G A C T A C T G A T G C A G T C A C T G A G T C C A G T A C T G A T C G A T G C A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGTGCCGCKGGCT
--NGCCTGAGGCN
 A C T G A T C G G A C T A C T G A T G C A G T C A C T G A G T C C A G T A C T G A T C G A T G C A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTGCCGCKGGCT--
GGNGCGNCTGTTNNN
 A C T G A T C G G A C T A C T G A T G C A G T C A C T G A G T C C A G T A C T G A T C G A T G C A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGTGCCGCKGGCT
GCGGAGGTGTCGCCTC--
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G G A C T A C T G A T G C A G T C A C T G A G T C C A G T A C T G A T C G A T G C A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTGCCGCKGGCT-
AGATGCTRCTRCCHT
 A C G T A C T G A T C G G A C T A C T G A T G C A G T C A C T G A G T C C A G T A C T G A T C G A T G C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTGCCGCKGGCT--
NTNGCCTCAGGCNNN
 A C T G A T C G G A C T A C T G A T G C A G T C A C T G A G T C C A G T A C T G A T C G A T G C A C G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGTGCCGCKGGCT
GGTCCCGCCC---
 A C T G A T C G G A C T A C T G A T G C A G T C A C T G A G T C C A G T A C T G A T C G A T G C A C G T
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T