Information for 4-CACGGTCACT (Motif 20)

A G T C C G T A A G T C A C T G A C T G A C G T A G T C G T C A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G
p-value:1e-7
log p-value:-1.668e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.4 +/- 15.4bp
Average Position of motif in Background60.0 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CACGGTCACT
TCAAGGTCAN-
 A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C G T C A A G T C A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACGGTCACT
BTCAAGGTCA--
 A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C G T C A A G T C A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CACGGTCACT
TCAAGGTCATA
 A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C G T C A A G T C A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CACGGTCACT---
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C G T C A A G T C A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CACGGTCACT
TCAAGGTCAT-
 A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C G T C A A G T C A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CACGGTCACT--
GTCACGCTCNCTGA
 A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C G T C A A G T C A C G T A C G T A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CACGGTCACT
NTCAAGGTCA--
 A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C G T C A A G T C A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CACGGTCACT
-AAGGTCAC-
 A G T C C G T A A G T C A C T G A C T G A C G T A G T C G T C A A G T C A C G T
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACGGTCACT
CAAGGHCANV
 A G T C C G T A A G T C A C T G A C T G A C G T A G T C G T C A A G T C A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACGGTCACT
TTCAAGGTCAT-
 A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C G T C A A G T C A C G T
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T