Information for 2-GGTGTTAGTA (Motif 4)

A C T G A C T G A C G T C T A G A C G T C A G T C G T A A C T G A C G T C T G A
Reverse Opposite:
A G C T C G T A G T A C A C G T G T C A C G T A A G T C C G T A A G T C G T A C
p-value:1e-14
log p-value:-3.240e+01
Information Content per bp:1.869
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif7.79%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets51.0 +/- 20.9bp
Average Position of motif in Background53.8 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MGA/MA0801.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGTGTTAGTA
AGGTGTGA---
 A C G T A C T G A C T G A C G T C T A G A C G T C A G T C G T A A C T G A C G T C T G A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGTGTTAGTA
AGGTGTGA---
 A C G T A C T G A C T G A C G T C T A G A C G T C A G T C G T A A C T G A C G T C T G A
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGTGTTAGTA
AGGTGTGA---
 A C G T A C T G A C T G A C G T C T A G A C G T C A G T C G T A A C T G A C G T C T G A
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGTGTTAGTA
AGGTGTGA---
 A C G T A C T G A C T G A C G T C T A G A C G T C A G T C G T A A C T G A C G T C T G A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGTGTTAGTA
AGGTGTGA---
 A C G T A C T G A C T G A C G T C T A G A C G T C A G T C G T A A C T G A C G T C T G A
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGTGTTAGTA
AAGGTGTGAAA-
 A C G T A C G T A C T G A C T G A C G T C T A G A C G T C A G T C G T A A C T G A C G T C T G A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGTGTTAGTA
AGGTGTTAAT-
 A C G T A C T G A C T G A C G T C T A G A C G T C A G T C G T A A C T G A C G T C T G A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTGTTAGTA
AGGTGTCA---
 A C G T A C T G A C T G A C G T C T A G A C G T C A G T C G T A A C T G A C G T C T G A
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGTGTTAGTA-
AAGGTGTGAAAAT
 A C G T A C G T A C T G A C T G A C G T C T A G A C G T C A G T C G T A A C T G A C G T C T G A A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTGTTAGTA
AAGGTGTGAA--
 A C G T A C G T A C T G A C T G A C G T C T A G A C G T C A G T C G T A A C T G A C G T C T G A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T