Information for 25-TGACCTTACT (Motif 31)

A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C C G T A
p-value:1e-2
log p-value:-4.999e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets45.0 +/- 22.4bp
Average Position of motif in Background80.1 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGACCTTACT
TGACCTYA--
 A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTTACT
GTGACCTT---
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGACCTTACT
TGACCTTGAT
 A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TGACCTTACT
NTGACCTTGA-
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTTACT
ATGACCTTGA-
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGACCTTACT
TGACCT----
 A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGACCTTACT--
TGACCTTTNCNT
 A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTTACT
BNTGDCCTTG--
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTTACT--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGACCTTACT--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A