Information for 18-AGGTRWCACT (Motif 24)

C G T A C A T G A C T G G A C T C T G A C G T A A G T C C G T A G T A C A G C T
Reverse Opposite:
C T G A A C T G A C G T A C T G G C A T A G C T C T G A A G T C G A T C A C G T
p-value:1e-7
log p-value:-1.682e+01
Information Content per bp:1.803
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.90%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.8 +/- 22.5bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGGTRWCACT
AGGTGTCA--
 C G T A C A T G A C T G G A C T C T G A C G T A A G T C C G T A G T A C A G C T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGGTRWCACT---
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T C G T A C A T G A C T G G A C T C T G A C G T A A G T C C G T A G T A C A G C T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGTRWCACT
AGGTGTGAAM
 C G T A C A T G A C T G G A C T C T G A C G T A A G T C C G T A G T A C A G C T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGTRWCACT-----
NNGGCGACACCTCNNN
 A C G T C G T A C A T G A C T G G A C T C T G A C G T A A G T C C G T A G T A C A G C T A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGTRWCACT
AGGTGTGA--
 C G T A C A T G A C T G G A C T C T G A C G T A A G T C C G T A G T A C A G C T
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGGTRWCACT---
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A C G T C G T A C A T G A C T G G A C T C T G A C G T A A G T C C G T A G T A C A G C T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGTRWCACT
AGGTGTGA--
 C G T A C A T G A C T G G A C T C T G A C G T A A G T C C G T A G T A C A G C T
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGGTRWCACT---
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T C G T A C A T G A C T G G A C T C T G A C G T A A G T C C G T A G T A C A G C T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGGTRWCACT---
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C G T C G T A C A T G A C T G G A C T C T G A C G T A A G T C C G T A G T A C A G C T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGGTRWCACT---
---MRSCACTYAA
 C G T A C A T G A C T G G A C T C T G A C G T A A G T C C G T A G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A